BLASTX nr result

ID: Angelica23_contig00030907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030907
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   117   7e-25
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...   105   3e-21
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    105   3e-21
ref|XP_002873799.1| hypothetical protein ARALYDRAFT_326131 [Arab...   102   2e-20

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  117 bits (294), Expect = 7e-25
 Identities = 53/72 (73%), Positives = 64/72 (88%)
 Frame = -1

Query: 379 KDGSTKSQYSSYATMLWNIRDQILSMDTPSFSRTLSERDWLKNSAKVWDLVKNSPIIAEY 200
           K  S ++QY SY +MLW +RDQ+LSM+ PSF+RT+SERDWL+NSAK+W+LVKNSPIIAEY
Sbjct: 348 KVDSPRAQYESYTSMLWKLRDQVLSMNCPSFARTISERDWLRNSAKIWELVKNSPIIAEY 407

Query: 199 SKTLQSSGMFRR 164
            KTLQSSGMFRR
Sbjct: 408 CKTLQSSGMFRR 419


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = -1

Query: 379 KDGSTKSQYSSYATMLWNIRDQILSMDTPSFSRTLSERDWLKNSAKVWDLVKNSPIIAEY 200
           KD S K+QY SY + LW +RDQ+LSM+  SF+RT+SERDWLKNSAK+W+LVK S IIAEY
Sbjct: 337 KDDSLKAQYKSYISALWKLRDQVLSMNGLSFARTVSERDWLKNSAKIWELVKGSAIIAEY 396

Query: 199 SKTLQSSGMFRR 164
            + LQ SGMFRR
Sbjct: 397 GQALQGSGMFRR 408


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = -1

Query: 379 KDGSTKSQYSSYATMLWNIRDQILSMDTPSFSRTLSERDWLKNSAKVWDLVKNSPIIAEY 200
           KD ST+ QY S+   LW +RDQ+LSM+  SF RT+SERDWLKNS K+W+ VK+SPI+ EY
Sbjct: 340 KDDSTRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEY 399

Query: 199 SKTLQSSGMFRR 164
           ++TLQSSGMFRR
Sbjct: 400 ARTLQSSGMFRR 411


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/72 (65%), Positives = 59/72 (81%)
 Frame = -1

Query: 379 KDGSTKSQYSSYATMLWNIRDQILSMDTPSFSRTLSERDWLKNSAKVWDLVKNSPIIAEY 200
           KD ST+ QY S+   LW +RDQ+LSM+  SF RT+SERDWLKNS K+W+ VK+SPI+ EY
Sbjct: 341 KDDSTRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEY 400

Query: 199 SKTLQSSGMFRR 164
           ++TLQSSGMFRR
Sbjct: 401 ARTLQSSGMFRR 412


>ref|XP_002873799.1| hypothetical protein ARALYDRAFT_326131 [Arabidopsis lyrata subsp.
           lyrata] gi|297319636|gb|EFH50058.1| hypothetical protein
           ARALYDRAFT_326131 [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/69 (65%), Positives = 59/69 (85%)
 Frame = -1

Query: 370 STKSQYSSYATMLWNIRDQILSMDTPSFSRTLSERDWLKNSAKVWDLVKNSPIIAEYSKT 191
           S+++Q+ SY   +W +RDQ+LS  + SFSR +SER+WLKNSAK+W++VKNSPIIAEYS+ 
Sbjct: 304 SSRNQHESYQLAMWKLRDQVLSSKSTSFSRPVSEREWLKNSAKIWEMVKNSPIIAEYSRA 363

Query: 190 LQSSGMFRR 164
           LQSSGMFRR
Sbjct: 364 LQSSGMFRR 372


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