BLASTX nr result

ID: Angelica23_contig00030903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030903
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana...   156   2e-36
ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata...   156   2e-36
ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              152   4e-35

>ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana]
           gi|75213379|sp|Q9SY69.1|PPR29_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN
           23 gi|4914329|gb|AAD32877.1|AC005489_15 F14N23.15
           [Arabidopsis thaliana] gi|332190439|gb|AEE28560.1|
           glutamine-rich protein 23 [Arabidopsis thaliana]
          Length = 913

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/122 (64%), Positives = 89/122 (72%)
 Frame = +3

Query: 3   PPLHAXXXXXXXXXXXXXXXXXXXXDTTSALVGPRLYLHNSVQSLIRAGDLDNASVIARK 182
           PPLHA                    D+TSALVG RL LHN VQSLIRA DLD AS +AR+
Sbjct: 111 PPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQ 170

Query: 183 SVFGNPRPTVFTCNAIVASMHMAKRYEDSIELFEYFFKQSNIVPNVVSYNYLMNAHCDMG 362
           SVF N RPTVFTCNAI+A+M+ AKRY +SI LF+YFFKQSNIVPNVVSYN ++NAHCD G
Sbjct: 171 SVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEG 230

Query: 363 NV 368
           NV
Sbjct: 231 NV 232


>ref|XP_002889798.1| glutamine-rich protein23 [Arabidopsis lyrata subsp. lyrata]
           gi|297335640|gb|EFH66057.1| glutamine-rich protein23
           [Arabidopsis lyrata subsp. lyrata]
          Length = 913

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/122 (64%), Positives = 89/122 (72%)
 Frame = +3

Query: 3   PPLHAXXXXXXXXXXXXXXXXXXXXDTTSALVGPRLYLHNSVQSLIRAGDLDNASVIARK 182
           PPLHA                    D+TSALVG RL LHN VQSLIRA DLD AS +AR+
Sbjct: 111 PPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQ 170

Query: 183 SVFGNPRPTVFTCNAIVASMHMAKRYEDSIELFEYFFKQSNIVPNVVSYNYLMNAHCDMG 362
           SVF N RPTVFTCNAI+A+M+ AKRY +SI LF+YFFKQSNIVPNVVSYN ++NAHCD G
Sbjct: 171 SVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEG 230

Query: 363 NV 368
           NV
Sbjct: 231 NV 232


>ref|XP_004173517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like, partial [Cucumis sativus]
          Length = 215

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = +3

Query: 78  DTTSALVGPRLYLHNSVQSLIRAGDLDNASVIARKSVFGNPRPTVFTCNAIVASMHMAKR 257
           D+TSALVGPRL LHN VQSLIRAGDLD AS +AR SVF N RPTVFTCNAI+A+M+ AKR
Sbjct: 99  DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 158

Query: 258 YEDSIELFEYFFKQSNIVPNVVSYNYLMNAHCDMGNV 368
           Y D+I LF++FF QSNIVPNVVSYN L+NAHCD G V
Sbjct: 159 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRV 195


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = +3

Query: 78  DTTSALVGPRLYLHNSVQSLIRAGDLDNASVIARKSVFGNPRPTVFTCNAIVASMHMAKR 257
           D+TSALVGPRL LHN VQSLIRAGDLD AS +AR SVF N RPTVFTCNAI+A+M+ AKR
Sbjct: 73  DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 132

Query: 258 YEDSIELFEYFFKQSNIVPNVVSYNYLMNAHCDMGNV 368
           Y D+I LF++FF QSNIVPNVVSYN L+NAHCD G V
Sbjct: 133 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRV 169


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = +3

Query: 78  DTTSALVGPRLYLHNSVQSLIRAGDLDNASVIARKSVFGNPRPTVFTCNAIVASMHMAKR 257
           D+TSALVGPRL LHN VQSLIRAGDLD AS +AR SVF N RPTVFTCNAI+A+M+ AKR
Sbjct: 99  DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKR 158

Query: 258 YEDSIELFEYFFKQSNIVPNVVSYNYLMNAHCDMGNV 368
           Y D+I LF++FF QSNIVPNVVSYN L+NAHCD G V
Sbjct: 159 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRV 195


Top