BLASTX nr result

ID: Angelica23_contig00030880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030880
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   155   3e-36
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   154   7e-36
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   149   2e-34
ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-...   131   7e-29
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/111 (69%), Positives = 90/111 (81%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 CEVVSPPLEAEFVDTVKNEDTGILLKPKQDIEVKSHM--QGPEIILKPKQGMFTKSAAQI 156
           CE VSP LE EF   VK+E+TGILL+PKQ +E++  +  +G  I LKPKQ +  KSAAQI
Sbjct: 99  CEAVSPALEVEFKTEVKSEETGILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQI 158

Query: 155 FHEQNGNMAPSARMGMSRRVHPLVSLNPYQGNWTIKVRLTNKGNMRNYKNA 3
            +EQ+GNMAP+ARM M+RRVHPLVSLNPYQGNWTIKVRLTNKG MR YKNA
Sbjct: 159 VNEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNA 209


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/111 (69%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 CEVVSPPLEAEFVDTVKNEDTGILLKPKQDIEVKSHM--QGPEIILKPKQGMFTKSAAQI 156
           CE VSP LE EF   VK+E+TGILL PKQ +E++  +  +G  I LKPKQ +  KSAAQI
Sbjct: 99  CEAVSPALEVEFKTEVKSEETGILLXPKQVVEIQXEVKXEGTGIFLKPKQEIVAKSAAQI 158

Query: 155 FHEQNGNMAPSARMGMSRRVHPLVSLNPYQGNWTIKVRLTNKGNMRNYKNA 3
            +EQ+GNMAP+ARM M+RRVHPLVSLNPYQGNWTIKVRLTNKG MR YKNA
Sbjct: 159 VNEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNA 209


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/109 (67%), Positives = 83/109 (76%)
 Frame = -3

Query: 329 CEVVSPPLEAEFVDTVKNEDTGILLKPKQDIEVKSHMQGPEIILKPKQGMFTKSAAQIFH 150
           CEVVSP LE E  D  K E+  I LKPKQ+ +V        I+LKPKQ M  KSAAQI H
Sbjct: 99  CEVVSPALEMEIKDEAKTEEAAITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVH 158

Query: 149 EQNGNMAPSARMGMSRRVHPLVSLNPYQGNWTIKVRLTNKGNMRNYKNA 3
           EQ+ NMAP+ARM M+RRVHPLVSLNPYQGNWTIKVR+T+KGNMR YKNA
Sbjct: 159 EQHKNMAPTARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNA 207


>ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 620

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 CEVVSPPLEAEFVDTVKNEDTG--ILLKPKQDIEVKSHMQGPEIILKPKQGMFTKSAAQI 156
           CE VSP LE E    +K+E++G  ILLKPK +  VK+      I+LKPKQ + TKSA QI
Sbjct: 100 CEAVSPALEME----IKSEESGSGILLKPKVEGGVKTEGAAAGILLKPKQEVVTKSANQI 155

Query: 155 FHEQNGNMAPSARMGMSRRVHPLVSLNPYQGNWTIKVRLTNKGNMRNYKNA 3
             EQ+GN AP+ARM M+RRV PLVSLNPYQGNWTIKV +T+KGNMR YKNA
Sbjct: 156 LREQHGNSAPAARMAMTRRVRPLVSLNPYQGNWTIKVSVTSKGNMRTYKNA 206


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  126 bits (316), Expect = 2e-27
 Identities = 69/109 (63%), Positives = 74/109 (67%)
 Frame = -3

Query: 329 CEVVSPPLEAEFVDTVKNEDTGILLKPKQDIEVKSHMQGPEIILKPKQGMFTKSAAQIFH 150
           CE VSP LE EF   VK   TGI LKPKQ+I                     KSAAQI +
Sbjct: 99  CEAVSPALEVEFKTEVKR--TGIFLKPKQEI-------------------VAKSAAQIVN 137

Query: 149 EQNGNMAPSARMGMSRRVHPLVSLNPYQGNWTIKVRLTNKGNMRNYKNA 3
           EQ+GNMAP+ARM M+RRVHPLVSLNPYQGNWTIKVRLTNKG MR YKNA
Sbjct: 138 EQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNA 186