BLASTX nr result

ID: Angelica23_contig00030877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030877
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...    63   2e-08
emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]    63   2e-08
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...    62   6e-08

>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/41 (80%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   LALKIMEVPSLMEEGSTIVKRNVLKQKPEYQRPS--GGCCS 119
           LALKIMEVPSLMEEGST VKRN+LKQKP+   PS  GGCCS
Sbjct: 173 LALKIMEVPSLMEEGSTAVKRNILKQKPDQHPPSSGGGCCS 213


>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/40 (80%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LALKIMEVPSLMEEGSTIVKRNVLKQKPEYQRPS-GGCCS 119
           LALKIMEVPSL+EEGST VKRN+LKQKPE+   S GGCCS
Sbjct: 169 LALKIMEVPSLLEEGSTAVKRNILKQKPEHHVASNGGCCS 208


>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LALKIMEVPSLMEEGSTIVKRNVLKQKPEYQ-RPSGGCCS 119
           LALKIMEVPSL+EEGST+ KRN+LK KPE Q  P+GGCCS
Sbjct: 172 LALKIMEVPSLLEEGSTVGKRNILKPKPENQPPPTGGCCS 211


>emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
          Length = 240

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LALKIMEVPSLMEEGSTIVKRNVLKQKPEYQ-RPSGGCCS 119
           LALKIMEVPSL+EEGST+ KRN+LK KPE Q  P+GGCCS
Sbjct: 201 LALKIMEVPSLLEEGSTVGKRNILKPKPENQPPPTGGCCS 240


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LALKIMEVPSLMEEGSTIVKRNVLKQKPEYQ-RPSGGCCS 119
           LALKIMEVPSL+EEGS+ VKRN+LKQKPE+Q     GCCS
Sbjct: 171 LALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210


Top