BLASTX nr result

ID: Angelica23_contig00030809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030809
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510522.1| translation initiation factor, putative [Ric...    75   5e-12
ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...    70   2e-10
ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...    68   9e-10

>ref|XP_002510522.1| translation initiation factor, putative [Ricinus communis]
           gi|223551223|gb|EEF52709.1| translation initiation
           factor, putative [Ricinus communis]
          Length = 514

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +2

Query: 26  NSGNMDELMATPENNNSDISETA-ASPVSXXXXXXXXXXXXXXXXXXSWRETGFSSLIMA 202
           +S +M+E+  + EN  +D+   A ASP+S                   W+E GFSSLI+A
Sbjct: 295 SSISMEEIPESSENQVADLDHDATASPISKMSKAPKAGERASEEALKLWKENGFSSLIIA 354

Query: 203 VPDMDAWTIVKEVLPLLSYSAPFAIY 280
            PD+DAW++VK +LPLLSYSAPFAI+
Sbjct: 355 APDLDAWSLVKVLLPLLSYSAPFAIF 380


>ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|222857164|gb|EEE94711.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/79 (46%), Positives = 45/79 (56%)
 Frame = +2

Query: 44  ELMATPENNNSDISETAASPVSXXXXXXXXXXXXXXXXXXSWRETGFSSLIMAVPDMDAW 223
           E M  P  + +  S+T  SP S                  SW+E GFSSLI+A PD DAW
Sbjct: 294 EEMPLPSKHEAADSQTIVSPQSKMGKAPKAGEKASEEALKSWKENGFSSLIIAAPDADAW 353

Query: 224 TIVKEVLPLLSYSAPFAIY 280
            +VK +LPL+SYSAPFAIY
Sbjct: 354 NLVKVLLPLISYSAPFAIY 372


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
           [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
           (adenine-N(1)-)-methyltransferase non-catalytic subunit
           trm6 [Medicago truncatula]
          Length = 457

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
 Frame = +2

Query: 29  SGNMDELMATPENNNSDIS-------ETAASPVSXXXXXXXXXXXXXXXXXXSWRETGFS 187
           S +M+E+  + EN  SD+        E++  P                    SW+E GFS
Sbjct: 305 SVSMEEISHSSENGISDLGADNAENIESSTFPALRACKAIKAGEKASQEIIDSWKENGFS 364

Query: 188 SLIMAVPDMDAWTIVKEVLPLLSYSAPFAIY 280
           SLI+A PD+D WT++K++LPLLS SAPFAIY
Sbjct: 365 SLIIAAPDLDTWTLIKDLLPLLSNSAPFAIY 395


>ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|222842437|gb|EEE79984.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +2

Query: 164 SWRETGFSSLIMAVPDMDAWTIVKEVLPLLSYSAPFAIY 280
           SW+E GFSSLI+A PD DAW++ K++LPLLSYSAPFAIY
Sbjct: 286 SWKENGFSSLIIAAPDADAWSLAKDLLPLLSYSAPFAIY 324


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6-like [Glycine max]
          Length = 440

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/84 (38%), Positives = 47/84 (55%)
 Frame = +2

Query: 29  SGNMDELMATPENNNSDISETAASPVSXXXXXXXXXXXXXXXXXXSWRETGFSSLIMAVP 208
           S +M+++  + EN  SD+      P                     W+E GFSSLI+A P
Sbjct: 294 STSMEDISHSSENGISDLGAENTEPAKEVWKAPKAGERAQKEIIDLWKENGFSSLIIAAP 353

Query: 209 DMDAWTIVKEVLPLLSYSAPFAIY 280
           ++D WT+V+++LPLL+ SAPFAIY
Sbjct: 354 ELDTWTLVRDILPLLADSAPFAIY 377


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