BLASTX nr result

ID: Angelica23_contig00030655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030655
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631645.1| PREDICTED: coatomer subunit gamma-2-like [Vi...    61   8e-07
ref|XP_002509477.1| coatomer gamma subunit, putative [Ricinus co...    57   8e-06

>ref|XP_003631645.1| PREDICTED: coatomer subunit gamma-2-like [Vitis vinifera]
            gi|297741448|emb|CBI32579.3| unnamed protein product
            [Vitis vinifera]
          Length = 887

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
 Frame = +1

Query: 367  SKIEEFDKIVLHKYLHACFGKYTKRLDRVRLG---MDHKVNTIVHILDRYLVLQYNYSS- 534
            S ++ ++K++     +A FGK  K    V L     ++ VN + HI DR++V QYN ++ 
Sbjct: 618  STVDAYEKLLSSIPEYASFGKPFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNT 677

Query: 535  ----LFNKATLSVDAPETFRLADFQLKTV-------PCKALVAFEIVGDVPTLSTFST-- 675
                L    T+ VDA +    ++   K +       P +  VAFE    VP +  FS   
Sbjct: 678  IPEQLLENVTVIVDASDAEEFSEVSTKPLRSLPYDSPGQTFVAFEKPDGVPAVGKFSNML 737

Query: 676  ---------TFCGKAQDGRWVVLPLEDLEVHVKNFLRGAGLSDFNRKWEEC--TFYTVDS 822
                     T     +DG      LEDLEV   +++   G+S+F   WE     F  VD 
Sbjct: 738  KFIVKEVDPTTGETEEDGVEDEYQLEDLEVVAADYVLKVGVSNFRNAWESMGPEFERVD- 796

Query: 823  EKALAQSLSLEEAKDVATKFLCLK 894
            E  L    SL EA       L L+
Sbjct: 797  EYGLGPRESLAEAVSTVISLLGLQ 820


>ref|XP_002509477.1| coatomer gamma subunit, putative [Ricinus communis]
            gi|223549376|gb|EEF50864.1| coatomer gamma subunit,
            putative [Ricinus communis]
          Length = 887

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 33/194 (17%)
 Frame = +1

Query: 367  SKIEEFDKIVLHKYLHACFGKYTKRLDRVRLG---MDHKVNTIVHILDRYLVLQYNYSS- 534
            S ++ +++++      + FGK  K    V L     ++ VN + HI D ++V QYN ++ 
Sbjct: 618  STVDAYERLLSSIPEFSNFGKLFKSSAPVELTEAETEYAVNVVKHIFDGHVVFQYNCTNT 677

Query: 535  ----LFNKATLSVDAPETFRLADFQLKTV-------PCKALVAFEIVGDVPTLSTFSTTF 681
                L    T+ VDA E    A+   K +       P +  VAFE +  VP +  FS   
Sbjct: 678  VPEQLLENVTVVVDASEAEDFAEVASKPLRSLPYDSPGQTFVAFEKLEGVPAVGKFSNML 737

Query: 682  ----------CGKAQ-DGRWVVLPLEDLEVHVKNFLRGAGLSDFNRKWE------ECT-F 807
                       G+A+ DG      LEDLEV   +++   G+S+F   WE      EC   
Sbjct: 738  RFIVKEVDQTTGEAEEDGVEDEYQLEDLEVVAADYMMKVGVSNFRNAWESMGPDCECVDE 797

Query: 808  YTVDSEKALAQSLS 849
            Y + + ++LA+++S
Sbjct: 798  YGLGARESLAEAVS 811


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