BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030573
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   109   3e-22
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              109   3e-22
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   109   3e-22
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   104   9e-21
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   103   1e-20

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/72 (75%), Positives = 60/72 (83%)
 Frame = +3

Query: 6   AFKQVFKDIQNLFYQYASEDNSFLAMLKAGSKKSNLTRAVQHGLCLGLQHSSVTLSFRIP 185
           AFKQ F+DIQNL YQYA++DNS LAMLKAGSK  NL + VQ GLCLGLQHS V LSF+IP
Sbjct: 736 AFKQKFRDIQNLVYQYANKDNSLLAMLKAGSK-GNLLKLVQQGLCLGLQHSLVPLSFKIP 794

Query: 186 QQLSCGAWNRQK 221
            QLSC AWN+QK
Sbjct: 795 HQLSCAAWNKQK 806


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/72 (75%), Positives = 60/72 (83%)
 Frame = +3

Query: 6   AFKQVFKDIQNLFYQYASEDNSFLAMLKAGSKKSNLTRAVQHGLCLGLQHSSVTLSFRIP 185
           AFKQ F+DIQNL YQYA++DNS LAMLKAGSK  NL + VQ GLCLGLQHS V LSF+IP
Sbjct: 605 AFKQKFRDIQNLVYQYANKDNSLLAMLKAGSK-GNLLKLVQQGLCLGLQHSLVPLSFKIP 663

Query: 186 QQLSCGAWNRQK 221
            QLSC AWN+QK
Sbjct: 664 HQLSCAAWNKQK 675


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/72 (75%), Positives = 60/72 (83%)
 Frame = +3

Query: 6   AFKQVFKDIQNLFYQYASEDNSFLAMLKAGSKKSNLTRAVQHGLCLGLQHSSVTLSFRIP 185
           AFKQ F+DIQNL YQYA++DNS LAMLKAGSK  NL + VQ GLCLGLQHS V LSF+IP
Sbjct: 706 AFKQKFRDIQNLVYQYANKDNSLLAMLKAGSK-GNLLKLVQQGLCLGLQHSLVPLSFKIP 764

Query: 186 QQLSCGAWNRQK 221
            QLSC AWN+QK
Sbjct: 765 HQLSCAAWNKQK 776


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +3

Query: 6   AFKQVFKDIQNLFYQYASEDNSFLAMLKAGSKKSNLTRAVQHGLCLGLQHSSVTLSFRIP 185
           AF+ VF+DIQ+L Y+YAS+DNSFLAM KAGSK  NL + VQH +CLGLQH+  +LSFRIP
Sbjct: 757 AFRLVFRDIQSLVYKYASQDNSFLAMFKAGSK-GNLLKLVQHSMCLGLQHALASLSFRIP 815

Query: 186 QQLSCGAWNRQK 221
            QLSC  WN+QK
Sbjct: 816 HQLSCAGWNKQK 827


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = +3

Query: 3   SAFKQVFKDIQNLFYQYASEDNSFLAMLKAGSKKSNLTRAVQHGLCLGLQHSSVTLSFRI 182
           SAFK+VF+DIQNL Y YAS DNS LAMLKAGSK  NL + VQH +CLGLQ S V +SFR+
Sbjct: 380 SAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSK-GNLLKLVQHNMCLGLQQSLVPVSFRM 438

Query: 183 PQQLSCGAWNRQK 221
           P+QLSC AWN  K
Sbjct: 439 PRQLSCDAWNNHK 451