BLASTX nr result

ID: Angelica23_contig00030493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030493
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...   115   3e-24
ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...   111   7e-23
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   109   3e-22
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   109   3e-22

>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
           gi|223527923|gb|EEF30010.1| ring finger protein,
           putative [Ricinus communis]
          Length = 345

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/108 (52%), Positives = 71/108 (65%)
 Frame = +3

Query: 3   RIHYHSPGKVQHKAVKQKPRKFHHASIMGDECMNMRESDDQFTVQPIRRSFSMDSAADRH 182
           ++   SP K++ K  K KPRK HH SIMGDEC+++RE DDQF++QPIRRSFS+DSA DR 
Sbjct: 238 QLRSQSPAKMEQKPGKLKPRKRHHLSIMGDECIDVREKDDQFSIQPIRRSFSLDSAVDRQ 297

Query: 183 IYLSVEEIIRQNRHQPEATNNEEXXXXXXXXXXXXGHVRGSRSTVLPI 326
           +YLSV+ II+QN HQ     +EE            GH  GSR   LPI
Sbjct: 298 LYLSVQNIIQQNTHQRGIYTSEESSNRVQTSFFHFGHSVGSRKAFLPI 345


>ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|222842507|gb|EEE80054.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/109 (50%), Positives = 70/109 (64%)
 Frame = +3

Query: 3   RIHYHSPGKVQHKAVKQKPRKFHHASIMGDECMNMRESDDQFTVQPIRRSFSMDSAADRH 182
           R+   SP K++ K  K K RK HH SIMGDEC+++R  DDQF++QP+RRSFS+DSA DR 
Sbjct: 233 RLRSRSPMKMEQKLGKLKTRKQHHVSIMGDECIDVRGKDDQFSIQPLRRSFSLDSAVDRQ 292

Query: 183 IYLSVEEIIRQNRHQPEATNNEEXXXXXXXXXXXXGHVRGSRSTVLPIQ 329
           +Y SV+ II QN H  E +N EE             HVRGSR  V P++
Sbjct: 293 LYSSVQAIIHQNIHHREISNTEESSNRVLRSVFPFVHVRGSRKAVRPVE 341


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +3

Query: 18  SPGKVQHKAVKQKPRKFHHASIMGDECMNMRESDDQFTVQPIRRSFSMDSAADRHIYLSV 197
           SP K+Q K   +K RKFH+ S MGDEC+++RE DDQF +QPIRRSFSMDSAAD  +Y++V
Sbjct: 244 SPTKLQQKLENKKSRKFHYVSSMGDECIDVREKDDQFLIQPIRRSFSMDSAADPQLYMTV 303

Query: 198 EEIIR-QNRHQPEATNNEEXXXXXXXXXXXXGHVRGSRSTVLPIQ 329
           +EIIR +NR   E + ++E            GH RGSR+ VLPI+
Sbjct: 304 QEIIRNKNRPLSEVSTSQECDSRVRRSFFSFGHGRGSRNAVLPIE 348


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/107 (49%), Positives = 72/107 (67%)
 Frame = +3

Query: 18  SPGKVQHKAVKQKPRKFHHASIMGDECMNMRESDDQFTVQPIRRSFSMDSAADRHIYLSV 197
           SP K++ + V +K RKFHH + MGDEC++ R  DDQF++QPIRRSFSMDS+ DR +YL++
Sbjct: 253 SPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAI 312

Query: 198 EEIIRQNRHQPEATNNEEXXXXXXXXXXXXGHVRGSRSTVLPIQS*P 338
           +EI++QNR   + + +E             GH RGSRS VLPI   P
Sbjct: 313 QEILQQNRPVSDFSPSEGCSSRFRRSFFSFGHGRGSRSAVLPIPMDP 359


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/107 (49%), Positives = 72/107 (67%)
 Frame = +3

Query: 18  SPGKVQHKAVKQKPRKFHHASIMGDECMNMRESDDQFTVQPIRRSFSMDSAADRHIYLSV 197
           SP K++ + V +K RKFHH + MGDEC++ R  DDQF++QPIRRSFSMDS+ DR +YL++
Sbjct: 313 SPRKLEQRIVPKKARKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAI 372

Query: 198 EEIIRQNRHQPEATNNEEXXXXXXXXXXXXGHVRGSRSTVLPIQS*P 338
           +EI++QNR   + + +E             GH RGSRS VLPI   P
Sbjct: 373 QEILQQNRPVSDFSPSEGCSSRFRRSFFSFGHGRGSRSAVLPIPMDP 419


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