BLASTX nr result

ID: Angelica23_contig00030485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030485
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37638.1| transposase [Populus trichocarpa]                       82   5e-14
ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...    67   2e-09

>gb|ABG37638.1| transposase [Populus trichocarpa]
          Length = 1450

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/46 (86%), Positives = 40/46 (86%)
 Frame = +2

Query: 209 GDEGLLQSRKQPEIREGSLWKRSPVTKVSLLPFDYVVTLTESNP*T 346
           GDE LLQSRKQPE R G LWKRSPVTK SLLPFDYVVTLTESNP T
Sbjct: 30  GDERLLQSRKQPETRRGRLWKRSPVTKASLLPFDYVVTLTESNPQT 75


>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +1

Query: 187 SDFFRLVGRRRATSI*KTAGNSRGQPLETFTGNQSVTPSF 306
           + FFRLVGRR+ATSI KTAGN RG PLE F GNQSVTPSF
Sbjct: 122 ASFFRLVGRRKATSIYKTAGNLRGSPLEAFAGNQSVTPSF 161


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