BLASTX nr result

ID: Angelica23_contig00030464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030464
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531104.1| DNA repair and recombination protein radB, p...   102   4e-20
emb|CBI16200.3| unnamed protein product [Vitis vinifera]               95   7e-18
gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| T...    94   9e-18
ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG3...    94   9e-18
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...    94   1e-17

>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/69 (65%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   AYEHNLSVLVTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSVSILRHPYIA 182
           A+EHN++VLVTNHMV  EGG+ KPALGESWK+IPH+RL LSRD+  N+C+V+IL+HP  A
Sbjct: 245 AHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRDQGKNVCNVTILKHPSQA 304

Query: 183 AGKAVSFSL 209
           +GKA  F++
Sbjct: 305 SGKAARFTV 313


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = +3

Query: 3   AYEHNLSVLVTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSVSILRHPYIA 182
           A+EHNL+V+VTNHMVG EGG LKPALGESWK+IPH+RL LSRD  S+IC +SIL+H Y+ 
Sbjct: 303 AHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYMV 362

Query: 183 AGKAVSFS 206
              ++SFS
Sbjct: 363 C--SLSFS 368


>gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| TPA: DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   AYEHNLSVLVTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSVSILRHPYIA 182
           AYEHNL+VLVTNHMV A  G +KPALGESWK++PH+RL +SR+  SNIC+ ++L+H  +A
Sbjct: 229 AYEHNLAVLVTNHMVSAGNGAVKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLA 288

Query: 183 AGKAVSFSL 209
           +G+   F L
Sbjct: 289 SGRTAKFVL 297


>ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG34419.1| DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +3

Query: 3   AYEHNLSVLVTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSVSILRHPYIA 182
           AYEHNL+VLVTNHMV A  G +KPALGESWK++PH+RL +SR+  SNIC+ ++L+H  +A
Sbjct: 229 AYEHNLAVLVTNHMVSAGNGAVKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLA 288

Query: 183 AGKAVSFSL 209
           +G+   F L
Sbjct: 289 SGRTAKFVL 297


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = +3

Query: 3   AYEHNLSVLVTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSVSILRHPYI 179
           A+EHNL+V+VTNHMVG EGG LKPALGESWK+IPH+RL LSRD  S+IC +SIL+H Y+
Sbjct: 244 AHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYM 302


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