BLASTX nr result

ID: Angelica23_contig00030402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030402
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   142   3e-32
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   137   7e-31
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   136   2e-30

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/91 (76%), Positives = 79/91 (86%)
 Frame = -3

Query: 275 ALQRYDGPFASLIKERYLDPLDSWTDDDHLNKFVALVEVSVDLDQLENGEYMISPSYDEK 96
           AL +YDG F+SLIKERYLDPL+S TDDDHLNKF+ALVE SVDLDQL+NGEY+ISPSYD  
Sbjct: 409 ALDKYDGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLDNGEYLISPSYDPA 468

Query: 95  LSSLKIEQESLEMQINKLHQQTASDLDLAID 3
           LS+LK EQESLE QI+ LH+QTA DLDL  D
Sbjct: 469 LSALKDEQESLECQIHNLHKQTAQDLDLPQD 499


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/91 (71%), Positives = 79/91 (86%)
 Frame = -3

Query: 275 ALQRYDGPFASLIKERYLDPLDSWTDDDHLNKFVALVEVSVDLDQLENGEYMISPSYDEK 96
           AL+RYDG F+SLIKE+YL+ L+ WTDD+HLNKF+ALVE +VDLDQL+NGEYMISP Y+  
Sbjct: 415 ALERYDGQFSSLIKEKYLESLEVWTDDNHLNKFIALVETAVDLDQLDNGEYMISPGYEAA 474

Query: 95  LSSLKIEQESLEMQINKLHQQTASDLDLAID 3
           L +LK EQESLE QI+ LH+QTASDLDL +D
Sbjct: 475 LGALKAEQESLEHQIHNLHKQTASDLDLPLD 505


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/91 (70%), Positives = 80/91 (87%)
 Frame = -3

Query: 275 ALQRYDGPFASLIKERYLDPLDSWTDDDHLNKFVALVEVSVDLDQLENGEYMISPSYDEK 96
           AL +YDG F+SLIKE+YLDPL+SWTDDDHLN+F+ LVE +VDL++LENGEYMIS  YD K
Sbjct: 373 ALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEYMISSGYDAK 432

Query: 95  LSSLKIEQESLEMQINKLHQQTASDLDLAID 3
           L+SLK +QE+LE+QI+ LH+QTA DLDL +D
Sbjct: 433 LASLKNDQETLELQIHNLHKQTAIDLDLPMD 463


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/91 (70%), Positives = 80/91 (87%)
 Frame = -3

Query: 275 ALQRYDGPFASLIKERYLDPLDSWTDDDHLNKFVALVEVSVDLDQLENGEYMISPSYDEK 96
           AL +YDG F+SLIKE+YLDPL+SWTDDDHLN+F+ LVE +VDL++LENGEYMIS  YD K
Sbjct: 413 ALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEYMISSGYDAK 472

Query: 95  LSSLKIEQESLEMQINKLHQQTASDLDLAID 3
           L+SLK +QE+LE+QI+ LH+QTA DLDL +D
Sbjct: 473 LASLKNDQETLELQIHNLHKQTAIDLDLPMD 503


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/90 (71%), Positives = 78/90 (86%)
 Frame = -3

Query: 272 LQRYDGPFASLIKERYLDPLDSWTDDDHLNKFVALVEVSVDLDQLENGEYMISPSYDEKL 93
           L+RYDG FA LI+ERY+D L+ W+DD+HLNKF+ALVE +VDLDQLENGEYMIS +YD  L
Sbjct: 414 LERYDGQFAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMISSAYDPNL 473

Query: 92  SSLKIEQESLEMQINKLHQQTASDLDLAID 3
           S+LK EQE+LE QI+ LH+QTA+DLDL ID
Sbjct: 474 SALKDEQETLEQQIHNLHKQTANDLDLPID 503


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