BLASTX nr result

ID: Angelica23_contig00030386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030386
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]   139   3e-31
emb|CBI21510.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KCGS+++A+K+FNS+IWRDVVCWNSMIST+AQHG+AEEAL MF  M+ EGIQPNYVTFV 
Sbjct: 488 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 547

Query: 82  VLSACGHVGLVEDGFHHFYSMSRFG 8
           VLSAC H G VEDG +HF SM  FG
Sbjct: 548 VLSACSHAGXVEDGLNHFNSMPGFG 572


>emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KCGS+++A+K+FNS+IWRDVVCWNSMIST+AQHG+AEEAL MF  M+ EGIQPNYVTFV 
Sbjct: 501 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 560

Query: 82  VLSACGHVGLVEDGFHHFYSMSRFG 8
           VLSAC H G VEDG +HF SM  FG
Sbjct: 561 VLSACSHAGRVEDGLNHFNSMPGFG 585



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMF-DGMINEGIQPNYVTFV 86
           K   +D+A+ +F+    ++++ W+SM+S Y+Q G +EEAL +F D     G  PN     
Sbjct: 96  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 155

Query: 85  GVLSACGHVGLVEDG--FHHFYSMSRFGQ 5
            V+ AC  +G+VE G   H F   S F Q
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQ 184


>ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/85 (74%), Positives = 73/85 (85%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KCGS+++A+K+FNS+IWRDVVCWNSMIST+AQHG+AEEAL MF  M+ EGIQPNYVTFV 
Sbjct: 580 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 639

Query: 82  VLSACGHVGLVEDGFHHFYSMSRFG 8
           VLSAC H G VEDG +HF SM  FG
Sbjct: 640 VLSACSHAGRVEDGLNHFNSMPGFG 664



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMF-DGMINEGIQPNYVTFV 86
           K   +D+A+ +F+    ++++ W+SM+S Y+Q G +EEAL +F D     G  PN     
Sbjct: 74  KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 133

Query: 85  GVLSACGHVGLVEDG--FHHFYSMSRFGQ 5
            V+ AC  +G+VE G   H F   S F Q
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQ 162


>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
           gi|449515698|ref|XP_004164885.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  132 bits (331), Expect = 4e-29
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KCGS+++A+KIF+S++W+D  CWNSMIS YAQHG+ EEAL+MF+ M++  I PNYVTFV 
Sbjct: 593 KCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVS 652

Query: 82  VLSACGHVGLVEDGFHHFYSMSRFG 8
           VLSAC HVG VEDG  H+ SM+R+G
Sbjct: 653 VLSACSHVGFVEDGLQHYNSMARYG 677


>ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KCGS++++ K F+S   RD+ CWNSMISTYAQHG A +AL++F+ MI EG++PNYVTFVG
Sbjct: 605 KCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVG 664

Query: 82  VLSACGHVGLVEDGFHHFYSMSRFG 8
           +LSAC H GL++ GFHHF SMS+FG
Sbjct: 665 LLSACSHAGLLDLGFHHFESMSKFG 689



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
 Frame = -2

Query: 262 KCGSLDDAQKIFNSAIWRDVVCWNSMISTYAQHGQAEEALKMFDGMINEGIQPNYVTFVG 83
           KC  + DA+ +F     RD+V WN+M S Y+Q  + EE+LK++  +    ++PN  TF  
Sbjct: 504 KCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAA 563

Query: 82  VLSACGHVGLVEDG--FHH 32
           V++A  ++  +  G  FH+
Sbjct: 564 VIAAASNIASLRHGQQFHN 582


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