BLASTX nr result

ID: Angelica23_contig00030369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030369
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu...   143   1e-32
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   143   2e-32
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31

>ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|222848762|gb|EEE86309.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = +3

Query: 3   YQFLDKLMQRIRAAGYVPVCESVMXXXXXXXXXXXXXXXSEKLAVAFGLLKTRQGMTITI 182
           Y +LD+LM++ R AGYV V +SVM               SEKLA+AFGLLKT +G  I I
Sbjct: 478 YHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRI 537

Query: 183 VKNLRMCEDCHTALKFISVICSREIVVRDKLRFHHFRNGSCSCMDYW 323
           VKNLRMCEDCH+A+K+ISVI +REI+VRDKLRFHHF+NGSCSC+DYW
Sbjct: 538 VKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584


>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 592

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/107 (62%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   YQFLDKLMQRIRAAGYVPVCESVMXXXXXXXXXXXXXXXSEKLAVAFGLLKTRQGMTITI 182
           Y +LD+LM R R AGY+P  ESVM               SEKLA+AFGLLKT  G+ I I
Sbjct: 486 YLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRI 545

Query: 183 VKNLRMCEDCHTALKFISVICSREIVVRDKLRFHHFRNGSCSCMDYW 323
           VKNLRMCEDCHTA+K+IS+I +REI VRD+LRFHHF++GSCSC DYW
Sbjct: 546 VKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592


>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/107 (63%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   YQFLDKLMQRIRAAGYVPVCESVMXXXXXXXXXXXXXXXSEKLAVAFGLLKTRQGMTITI 182
           Y++LD+LM R + AGYVP  E VM               SEKLA+AFGL+KT  GMTI I
Sbjct: 455 YKYLDELMLRSKEAGYVPAPELVMHELEEEEREYALRYHSEKLAIAFGLMKTSHGMTIRI 514

Query: 183 VKNLRMCEDCHTALKFISVICSREIVVRDKLRFHHFRNGSCSCMDYW 323
           VKNLRMCEDCH+A+KFIS I +REI+VRDKLRFHHF+NG CSC DYW
Sbjct: 515 VKNLRMCEDCHSAIKFISNIANREIIVRDKLRFHHFKNGLCSCQDYW 561


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/107 (63%), Positives = 78/107 (72%)
 Frame = +3

Query: 3   YQFLDKLMQRIRAAGYVPVCESVMXXXXXXXXXXXXXXXSEKLAVAFGLLKTRQGMTITI 182
           Y +LD+LM +   AGYVPV +SVM               SEKLA+AFGLLKT  G  I I
Sbjct: 479 YHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTSHGTPIRI 538

Query: 183 VKNLRMCEDCHTALKFISVICSREIVVRDKLRFHHFRNGSCSCMDYW 323
           VKNLRMCEDCH+A+KFIS I SREI+VRDKLRFHHF+ GSCSC+DYW
Sbjct: 539 VKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/107 (61%), Positives = 78/107 (72%)
 Frame = +3

Query: 3   YQFLDKLMQRIRAAGYVPVCESVMXXXXXXXXXXXXXXXSEKLAVAFGLLKTRQGMTITI 182
           Y FLD+L+ R + AGY PV ES M               SEKLAVAFGL+KT  G+T+ I
Sbjct: 476 YCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRI 535

Query: 183 VKNLRMCEDCHTALKFISVICSREIVVRDKLRFHHFRNGSCSCMDYW 323
           VKNLR+CEDCH+A+KFIS + +REI+VRDKLRFHHFR GSCSC DYW
Sbjct: 536 VKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582


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