BLASTX nr result

ID: Angelica23_contig00030195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030195
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32318.3| unnamed protein product [Vitis vinifera]               86   6e-18
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...    84   2e-17
ref|XP_004170753.1| PREDICTED: uncharacterized protein LOC101227...    84   2e-17
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...    80   2e-17
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...    82   1e-16

>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 86.3 bits (212), Expect(2) = 6e-18
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -1

Query: 315 EKWGIDLILGCNGFIWVGEHIDTKDDMVEDQVTKSEQQNENPGDNFSKETCTSVEIRQNI 136
           E++G+DLILGCNGFIWVGEH++ K  ++EDQ  K+EQ N       SK T TS+E RQNI
Sbjct: 201 EEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNTKS----SKRTYTSLETRQNI 256

Query: 135 CRAANAVSAM 106
           CR ANAV  +
Sbjct: 257 CRIANAVRVL 266



 Score = 31.6 bits (70), Expect(2) = 6e-18
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -3

Query: 358 RGQLLTVPPYLVKRRK 311
           RGQ+LT+ PYLVKRRK
Sbjct: 179 RGQVLTISPYLVKRRK 194


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score = 83.6 bits (205), Expect(2) = 2e-17
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
 Frame = -1

Query: 315 EKWGIDLILGCNGFIWVGEHIDTK--DDMVEDQVTKSEQQN---ENPGDNFSKETCTSVE 151
           E++GIDLILGCNGFIW+GEH+D K  D M+EDQV K EQ+    E    N  +E  T +E
Sbjct: 200 EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLE 259

Query: 150 IRQNICRAANAVSAM 106
            RQNICR ANA+  +
Sbjct: 260 TRQNICRTANAIRVL 274



 Score = 32.7 bits (73), Expect(2) = 2e-17
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 358 RGQLLTVPPYLVKRRK 311
           RGQLLTV PYL+KRRK
Sbjct: 178 RGQLLTVSPYLIKRRK 193


>ref|XP_004170753.1| PREDICTED: uncharacterized protein LOC101227941, partial [Cucumis
           sativus]
          Length = 176

 Score = 83.6 bits (205), Expect(2) = 2e-17
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
 Frame = -1

Query: 315 EKWGIDLILGCNGFIWVGEHIDTK--DDMVEDQVTKSEQQN---ENPGDNFSKETCTSVE 151
           E++GIDLILGCNGFIW+GEH+D K  D M+EDQV K EQ+    E    N  +E  T +E
Sbjct: 49  EQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKGSKFEGTFGNQVQEVYTPLE 108

Query: 150 IRQNICRAANAVSAM 106
            RQNICR ANA+  +
Sbjct: 109 TRQNICRTANAIRVL 123



 Score = 32.7 bits (73), Expect(2) = 2e-17
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 358 RGQLLTVPPYLVKRRK 311
           RGQLLTV PYL+KRRK
Sbjct: 27  RGQLLTVSPYLIKRRK 42


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score = 80.5 bits (197), Expect(3) = 2e-17
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
 Frame = -1

Query: 315 EKWGIDLILGCNGFIWVGEHIDTKDDMVEDQVTKSEQQNENPGDNF-----SKETCTSVE 151
           E++GIDLILGCNGFIWVGEH++ KDDM+EDQV++S+ Q   P  N       ++  T +E
Sbjct: 200 EEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLFPNKNCVSLEEQEKNYTILE 259

Query: 150 IRQNICRAANAVSAM 106
            R+ I RAANAV  +
Sbjct: 260 TRKYISRAANAVRVL 274



 Score = 34.7 bits (78), Expect(3) = 2e-17
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 358 RGQLLTVPPYLVKRRK 311
           RGQLLTVPPYLVKR+K
Sbjct: 178 RGQLLTVPPYLVKRQK 193



 Score = 20.8 bits (42), Expect(3) = 2e-17
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 113 VLCALGFNITADV 75
           VL  LGFNIT ++
Sbjct: 273 VLSTLGFNITLEI 285


>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score = 82.0 bits (201), Expect(2) = 1e-16
 Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
 Frame = -1

Query: 315 EKWGIDLILGCNGFIWVGEHIDTKDDMVEDQVTKSEQQNENPGDNF------SKETCTSV 154
           E++G+DLILGCNGFIWVGEH++ K  ++EDQ  K+EQ N     +        + T TS+
Sbjct: 201 EEFGVDLILGCNGFIWVGEHVEAKGILIEDQTDKAEQLNTKSSSSTFMSLEEQERTYTSL 260

Query: 153 EIRQNICRAANAVSAM 106
           E RQNICR ANAV  +
Sbjct: 261 ETRQNICRIANAVRVL 276



 Score = 31.6 bits (70), Expect(2) = 1e-16
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -3

Query: 358 RGQLLTVPPYLVKRRK 311
           RGQ+LT+ PYLVKRRK
Sbjct: 179 RGQVLTISPYLVKRRK 194


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