BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030147
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   208   4e-52
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   192   2e-47
ref|NP_175971.3| transcription initiation factor TFIIH subunit H...   189   2e-46
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   188   3e-46
ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  208 bits (529), Expect = 4e-52
 Identities = 99/135 (73%), Positives = 116/135 (85%)
 Frame = +3

Query: 6   EVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTSIQELLKHFWSSYP 185
           ++A KV + LTQ IS++ +HLGK+P ESVLD LP +TKEE+LH WTSIQELL+HFWSSYP
Sbjct: 467 DIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYP 526

Query: 186 ITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMTQALDAAFAHYEAD 365
           ITTTYL+ K +++KDAMS+IY KLQEIK SVQ DFRH VSLLVQPM QALDAAFAHY+AD
Sbjct: 527 ITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDAD 586

Query: 366 FQKRSTKSAERPNGF 410
            QKRS +S ERPNGF
Sbjct: 587 QQKRSARSGERPNGF 601


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cucumis sativus]
          Length = 729

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/136 (66%), Positives = 114/136 (83%)
 Frame = +3

Query: 6    EVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTSIQELLKHFWSSYP 185
            EVA  V++ LTQ IS++ Y LGK+P ES+L+ LPN TKEE+LH W SIQELLKHFWSSYP
Sbjct: 594  EVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHHWISIQELLKHFWSSYP 653

Query: 186  ITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMTQALDAAFAHYEAD 365
            ITT+YL+ KV+++KDAM+KIY++L+EIK +V  DFRH VSLLV+PM QALDAAF H++AD
Sbjct: 654  ITTSYLYTKVSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMHQALDAAFQHHDAD 713

Query: 366  FQKRSTKSAERPNGFS 413
             QKRS KS ER NG++
Sbjct: 714  MQKRSVKSGERLNGYT 729


>ref|NP_175971.3| transcription initiation factor TFIIH subunit H1 [Arabidopsis
           thaliana] gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| transcription initiation
           factor TFIIH subunit H1 [Arabidopsis thaliana]
          Length = 591

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/135 (67%), Positives = 106/135 (78%)
 Frame = +3

Query: 6   EVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTSIQELLKHFWSSYP 185
           EV+F+VFS LT+ I+ +    GK+P ES LD LP  TK+E+LH WTSIQELLKHFWSSYP
Sbjct: 456 EVSFEVFSSLTRTIATAKNINGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYP 515

Query: 186 ITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMTQALDAAFAHYEAD 365
           ITTTYLH KV K+KDAMS  Y KL+ +K SVQ D RH VSLLV+PM QALDAAF HYE D
Sbjct: 516 ITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVD 575

Query: 366 FQKRSTKSAERPNGF 410
            Q+R+ KS ERPNG+
Sbjct: 576 LQRRTAKSGERPNGY 590


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/136 (67%), Positives = 108/136 (79%), Gaps = 1/136 (0%)
 Frame = +3

Query: 6   EVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTSIQELLKHFWSSYP 185
           EV+F+VFS LT+ IS +   +GK+P ES LD LP  TK+E+LH WTSIQELL+HFWSSYP
Sbjct: 456 EVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYP 515

Query: 186 ITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMTQALDAAFAHYEAD 365
           ITTTYLH KV K+KDAMS  Y KL+ +K SVQ D RH VSLLV+PM QALDAAF HYEAD
Sbjct: 516 ITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEAD 575

Query: 366 FQKRSTKS-AERPNGF 410
            Q+R+ KS  ERPNG+
Sbjct: 576 LQRRTAKSGGERPNGY 591


>ref|XP_002310512.1| predicted protein [Populus trichocarpa] gi|222853415|gb|EEE90962.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/136 (61%), Positives = 107/136 (78%)
 Frame = +3

Query: 6   EVAFKVFSELTQRISNSNYHLGKDPHESVLDGLPNVTKEEILHQWTSIQELLKHFWSSYP 185
           EVA KV S LT  IS++ Y  GK+   SVLD LPN  KEE+L+ WTS+QELLKH+WSSYP
Sbjct: 468 EVAVKVLSVLTHNISSTKYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYP 527

Query: 186 ITTTYLHIKVNKVKDAMSKIYQKLQEIKSSVQQDFRHPVSLLVQPMTQALDAAFAHYEAD 365
           ITTTYL+ KV+++KDAMSKI  +LQE+K SVQ D RH V+LL++PM QAL+AA  HY+A+
Sbjct: 528 ITTTYLYTKVSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAE 587

Query: 366 FQKRSTKSAERPNGFS 413
            QKRS +S +R NG++
Sbjct: 588 LQKRSARSGDRSNGYT 603