BLASTX nr result

ID: Angelica23_contig00030110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030110
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18968.3| unnamed protein product [Vitis vinifera]              221   9e-56
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   214   2e-53
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   179   7e-43
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   170   3e-40
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          139   5e-31

>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  221 bits (564), Expect = 9e-56
 Identities = 124/215 (57%), Positives = 150/215 (69%), Gaps = 4/215 (1%)
 Frame = -1

Query: 739  CTVSQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGRSDK--AEADHTRRVKKKAKL 566
            C +SQYPTQA +M+S D  SQL +QS DL  + T+    RSD+   EA H+    K+A+L
Sbjct: 737  CIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSVHAKRARL 796

Query: 565  SDSDRRNSKLPSIKSPINPICEINTKESFSTEKPVEVSFAVPDVAAAIEDLLEETSKIPD 386
             + + + +  PS    ++ I ++N+  +  T    E S  VPDVAAAIEDLLE+TSKI D
Sbjct: 797  LEDESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHD 856

Query: 385  QKSPERTGCVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDKKEDNCIP--FQEKSIY 212
             KSP RTGC K LFSSDCS LGQDHAD  S F LSKHW++R +KK+D C P    + S Y
Sbjct: 857  LKSPGRTGCEKHLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPGDVKASTY 916

Query: 211  DGFSETQTESQVVGYEEDLSGRQMIIDRVRTRGSM 107
            DGFSETQTESQVVGYEEDLSGRQMIIDRVRTR SM
Sbjct: 917  DGFSETQTESQVVGYEEDLSGRQMIIDRVRTRSSM 951


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  214 bits (545), Expect = 2e-53
 Identities = 123/225 (54%), Positives = 151/225 (67%), Gaps = 14/225 (6%)
 Frame = -1

Query: 739  CTVSQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGRSDK--AEADHTRRVKKKAKL 566
            C +SQYPTQA +M+S D  SQL +QS DL  + T+    RSD+   EA H+    K+A+L
Sbjct: 737  CIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSVHAKRARL 796

Query: 565  SDSDRRNSKLPSIKSPINPICEINTKESFSTEKPVEVSFAVPDVAAAIEDLLEETSKIPD 386
             + + + +  PS    ++ I ++N+  +  T    E S  VPDVAAAIEDLLE+TSKI D
Sbjct: 797  LEDESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHD 856

Query: 385  QKSPERTGC----------VKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDKKEDNCI 236
             KSP RTGC          ++ LFSSDCS LGQDHAD  S F LSKHW++R +KK+D C 
Sbjct: 857  LKSPGRTGCEKHVSLESLTIEQLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICN 916

Query: 235  PFQE--KSIYDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRGSM 107
            P  +   S YDGFSETQTESQVVGYEEDLSGRQMIIDRVRTR SM
Sbjct: 917  PPGDVKASTYDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRSSM 961


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  179 bits (453), Expect = 7e-43
 Identities = 105/215 (48%), Positives = 140/215 (65%), Gaps = 4/215 (1%)
 Frame = -1

Query: 739  CTVSQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGRSDKAEADHT--RRVKKKAKL 566
            CTVSQ+PTQAV+M+S D  SQL+SQS  L+    +      D  E          KKA+L
Sbjct: 756  CTVSQFPTQAVQMIS-DLPSQLSSQSQTLRGTTNKNVSCGVDNHETSFRIPSNYSKKARL 814

Query: 565  SDSDRRNSKLPSIKSPINPICEINTKESFSTEKPVEVSFAVPDVAAAIEDLLEETSKIPD 386
             +    ++K PS  +      + N  +        E   AVPDVAAAIEDLLE+TSK+ D
Sbjct: 815  VEEPCLSNKKPSASNSGIHADDKNFSKDNMLIDAGEAFHAVPDVAAAIEDLLEQTSKMHD 874

Query: 385  QKSPERTGCVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDKKEDNCIPFQEK--SIY 212
            Q+SP +TGC +S++ SD S+L +D+++  + F LSKHW++R+ +K+DN    Q++   IY
Sbjct: 875  QRSPAQTGCERSIYPSDRSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRAGIY 934

Query: 211  DGFSETQTESQVVGYEEDLSGRQMIIDRVRTRGSM 107
            DGFSETQTESQVV YEEDLSGRQM+IDRVRTR S+
Sbjct: 935  DGFSETQTESQVVSYEEDLSGRQMLIDRVRTRSSL 969


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  170 bits (430), Expect = 3e-40
 Identities = 105/225 (46%), Positives = 139/225 (61%), Gaps = 14/225 (6%)
 Frame = -1

Query: 739  CTVSQYPTQAVKMVSGDGASQLTSQSLDLKCLRTEL--TGGRSDKAEADHTRRVKKKAKL 566
            CTVSQ+PTQA +M+SG+  SQL SQS DL+   T+    G  S   +A  + +  KKA+L
Sbjct: 728  CTVSQFPTQAARMISGENPSQLISQSRDLRSAPTQTGSIGIFSFGEDAQKSTKYSKKARL 787

Query: 565  SDSDRRNSKLPSIKSPINPICEINTKESFSTEKPVEVSFAVPDVAAAIEDLLEETSKIPD 386
              SD + ++L       +P+  IN+     ++     S  VPDVAAAIEDLLE+TSKI D
Sbjct: 788  LKSDDQEAQLSFHLD--DPVYTINSTRGNDSKDTAGSSHGVPDVAAAIEDLLEQTSKIHD 845

Query: 385  QKSPERTG----------CVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDKKEDNCI 236
            QKS  ++            ++ L+ SD  ILG+DH    S   +  HW++RT K++D   
Sbjct: 846  QKSLGKSEYSMFASVESLTIEQLYPSD-PILGEDHGGSHSVIGVPNHWLNRTGKRDDLSN 904

Query: 235  PFQE--KSIYDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRGSM 107
            P +E  + +YD F+ETQTESQVV YEEDLSGRQMIIDRVRTR SM
Sbjct: 905  PSREVNRGVYDNFTETQTESQVVLYEEDLSGRQMIIDRVRTRSSM 949


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  139 bits (351), Expect = 5e-31
 Identities = 97/218 (44%), Positives = 123/218 (56%), Gaps = 7/218 (3%)
 Frame = -1

Query: 739  CTVSQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGRSDKAEADHTRR---VKKKAK 569
            C VSQ+PTQ  +M+SG   SQ TSQS DLK   T++ GG S  +  +  R+     KKA+
Sbjct: 729  CIVSQFPTQPAQMISG--VSQYTSQSQDLKSEPTQI-GGTSITSFGEEVRKSSDFSKKAR 785

Query: 568  LSDSDRRNSKLPSIKSPINPICEINTKESFSTEKPVEVSFAVPDVAAAIEDLLEETSKIP 389
            L +S  + S L S     + IC IN+    +++   E S  V DVAA IEDLLE+TSKI 
Sbjct: 786  LLESGGQKSLLSSGVHLSDSICNINSSGGNNSKDNKESSSCVSDVAAVIEDLLEQTSKIH 845

Query: 388  DQKSPERTGCVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDKKEDNCIPFQEK---- 221
            D KSPERT         + S+ G                     K+++   P   K    
Sbjct: 846  DHKSPERT-----QHDENVSLPG---------------------KRDELSTPASSKDGNN 879

Query: 220  SIYDGFSETQTESQVVGYEEDLSGRQMIIDRVRTRGSM 107
             +YDGFSETQT+SQVVGYEEDLSGRQM+IDRVRTR S+
Sbjct: 880  GMYDGFSETQTDSQVVGYEEDLSGRQMLIDRVRTRSSI 917


Top