BLASTX nr result

ID: Angelica23_contig00030045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030045
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinife...   159   9e-37
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...   156   5e-36
ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1...   150   4e-34
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...   147   4e-33
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like...   142   9e-32

>emb|CAN82659.1| hypothetical protein VITISV_011978 [Vitis vinifera]
           gi|297740676|emb|CBI30858.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  159 bits (401), Expect = 9e-37
 Identities = 84/151 (55%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
 Frame = -3

Query: 695 MNEQDKNSSRGYVDQPSAPPPTPYYYGTFQGVVN--SXXXXXXXXXXXXXXXPVPPVAYY 522
           M+E+ K  SRG   Q S   P    YGTFQGV N                  PVPP  YY
Sbjct: 1   MSEEGK--SRGLSGQQSNQIP----YGTFQGVANYPPLPPAHHPQPVIGIPQPVPPPGYY 54

Query: 521 SHGYQNVPGYVFPDGTPYLEHRLPCCGMGIGWFLFICGFLFGSIPWYIGACLLLFAQMDY 342
           SHGYQ VPGY   +G P  E RLPCCG+GIGW LFI GF   +IPWYIGA +LL  ++DY
Sbjct: 55  SHGYQTVPGYAVVEGRPVRERRLPCCGIGIGWLLFIIGFFCAAIPWYIGAFILLCVRVDY 114

Query: 341 REKPGLIVCTLASILATIAIMLGVTKATNAW 249
           REKPGLI CT+A++LA IAI LGVTK T+AW
Sbjct: 115 REKPGLIACTIATVLAVIAITLGVTKGTHAW 145


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score =  156 bits (395), Expect = 5e-36
 Identities = 78/166 (46%), Positives = 97/166 (58%), Gaps = 17/166 (10%)
 Frame = -3

Query: 695 MNEQDKNSSRGYV------------DQPSAPPPTPYYYGTFQGVVNSXXXXXXXXXXXXX 552
           M++++K  SR  +             Q S PPP P  YGTFQGV N              
Sbjct: 1   MSDEEKGHSRAVIIDHQHHQYHHQHPQQSQPPPPPPQYGTFQGVANYPPPHPPQHPVIGF 60

Query: 551 XXPVPPVAY-----YSHGYQNVPGYVFPDGTPYLEHRLPCCGMGIGWFLFICGFLFGSIP 387
             PVPP        Y HGYQ VPGY   +G P  E RLPCCG+G+GWFLFI GF  G+IP
Sbjct: 61  PQPVPPPGASEPPAYPHGYQTVPGYAVAEGRPVRERRLPCCGIGVGWFLFIIGFFLGAIP 120

Query: 386 WYIGACLLLFAQMDYREKPGLIVCTLASILATIAIMLGVTKATNAW 249
           WY+G  +LL A++D REKPG + CT+A++LATIAI+LG TK  + W
Sbjct: 121 WYVGLFILLCARIDPREKPGYVACTIAAVLATIAIVLGATKGADDW 166


>ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1|
           unknown [Populus trichocarpa]
           gi|222846181|gb|EEE83728.1| predicted protein [Populus
           trichocarpa]
          Length = 156

 Score =  150 bits (378), Expect = 4e-34
 Identities = 74/156 (47%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
 Frame = -3

Query: 695 MNEQDKNSS-----RGYVDQPSAPPPTPYYYGTFQGVVNSXXXXXXXXXXXXXXXPVPPV 531
           M++Q+KN       R + DQP  PPP    YGTFQGV N                P P +
Sbjct: 1   MSDQEKNRGVVVDHRHHEDQPPPPPPPQPQYGTFQGVANYPPPSQSHVIGFPQPVPPPGI 60

Query: 530 AY--YSHGYQNVPGYVFPDGTPYLEHRLPCCGMGIGWFLFICGFLFGSIPWYIGACLLLF 357
               Y+ GYQ VPGY   +G P  + RLPCCG G+GWFLFI GF  G+IPWYIG  ++  
Sbjct: 61  TAEPYAQGYQTVPGYAVAEGRPVRQRRLPCCGCGVGWFLFIIGFFLGAIPWYIGLFIIAC 120

Query: 356 AQMDYREKPGLIVCTLASILATIAIMLGVTKATNAW 249
            ++D REKPG + CT+A+ILATIAI+LG TK  + W
Sbjct: 121 MRIDPREKPGYVACTIAAILATIAIILGATKGADEW 156


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  147 bits (370), Expect = 4e-33
 Identities = 78/154 (50%), Positives = 93/154 (60%), Gaps = 8/154 (5%)
 Frame = -3

Query: 695 MNEQDKNSSRGYVDQPSAPPPTPYYYGTFQGV--------VNSXXXXXXXXXXXXXXXPV 540
           M+E+ KN S    DQ         +YGTFQGV        V                 P 
Sbjct: 1   MSEESKNRS----DQ---------HYGTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPP 47

Query: 539 PPVAYYSHGYQNVPGYVFPDGTPYLEHRLPCCGMGIGWFLFICGFLFGSIPWYIGACLLL 360
           PP  YY+HGYQ VPGY   +GTP  E RLPCCG+G+GWFLFI GF   ++PWY+G  LLL
Sbjct: 48  PPPQYYAHGYQAVPGYAVAEGTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLL 107

Query: 359 FAQMDYREKPGLIVCTLASILATIAIMLGVTKAT 258
            A++DYREKPG I CT+A+ILATIAI+ GVTK T
Sbjct: 108 CARVDYREKPGYIACTIAAILATIAIIFGVTKGT 141


>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 153

 Score =  142 bits (358), Expect = 9e-32
 Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 7/156 (4%)
 Frame = -3

Query: 695 MNEQDKNSSRGYVDQPSAPPPTPY-YYGTFQGVVNSXXXXXXXXXXXXXXXPVP----PV 531
           M+EQDK+++ G V        +P+ +YGTFQGV N                 VP    P 
Sbjct: 1   MSEQDKSAAVGVVVHHHHESNSPHPHYGTFQGVAN---YPPVGFSHPTRLPGVPDSDDPS 57

Query: 530 AY--YSHGYQNVPGYVFPDGTPYLEHRLPCCGMGIGWFLFICGFLFGSIPWYIGACLLLF 357
            Y  Y+HGYQ VPGY   +G P  E RLPCCG+GIGWFLFI GF   +IPWY GA L++ 
Sbjct: 58  QYQHYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIIC 117

Query: 356 AQMDYREKPGLIVCTLASILATIAIMLGVTKATNAW 249
            ++DYREKPG + C++A+++AT+AI+ G T+  + W
Sbjct: 118 GRVDYREKPGYVACSIAAVIATVAIIFGATREADVW 153


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