BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00030005
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    92   5e-23
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]    81   1e-21
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...    74   1e-20
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-20
ref|XP_002885074.1| pentatricopeptide repeat-containing protein ...    80   3e-19

>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 92.4 bits (228), Expect(2) = 5e-23
 Identities = 47/74 (63%), Positives = 61/74 (82%)
 Frame = -1

Query: 306 WVSRGEHGREYLPGTGAYNEILDVLGKMKRFDELHQVLDEMSERKNGVFSEITYRIVVNR 127
           WVS+G    + L G+GAYNEILD+LGKM+RFDEL QVLD MS+R+ G+ +E TYR++VNR
Sbjct: 103 WVSKGG---KVLMGSGAYNEILDILGKMRRFDELSQVLDIMSKRE-GLVNEETYRVLVNR 158

Query: 126 YAAAHRLDEATEFF 85
           YAAAH+++EA E F
Sbjct: 159 YAAAHKVEEAIEIF 172



 Score = 40.0 bits (92), Expect(2) = 5e-23
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 95  LSFFYRRAQFGLRLDLIAFQTLLLALCRYKH 3
           +  F  R   GL +DL++FQ LL+ LCRYKH
Sbjct: 169 IEIFNTRRDIGLEIDLVSFQNLLMFLCRYKH 199


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score = 80.9 bits (198), Expect(2) = 1e-21
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = -1

Query: 306 WVSRGEHGREYLPGTGAYNEILDVLGKMKRFDELHQVLDEMSERKNGVFSEITYRIVVNR 127
           W SR      Y PG G +NEILD+LG+M+RF E+ Q+ DEMS+RK G+ +E T+ +++NR
Sbjct: 141 WASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRK-GLXNERTFGVLLNR 199

Query: 126 YAAAHRLDEATEFF 85
           YAAAH+ +EA + F
Sbjct: 200 YAAAHKTEEAVKIF 213



 Score = 47.4 bits (111), Expect(2) = 1e-21
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = -2

Query: 95  LSFFYRRAQFGLRLDLIAFQTLLLALCRYKH 3
           +  FY+R   G  LDLIAFQTLL++LCRYKH
Sbjct: 210 VKIFYKRKGLGFELDLIAFQTLLMSLCRYKH 240


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score = 74.3 bits (181), Expect(2) = 1e-20
 Identities = 37/75 (49%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -1

Query: 306 WV-SRGEHGREYLPGTGAYNEILDVLGKMKRFDELHQVLDEMSERKNGVFSEITYRIVVN 130
           WV  RG +  ++ PG+  YNEIL +LGK +RF+E+ +VL EMS+RK  + +E TY +++N
Sbjct: 146 WVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKE-LVNEETYSVLLN 204

Query: 129 RYAAAHRLDEATEFF 85
           RYAAAH+++EA   F
Sbjct: 205 RYAAAHKVEEAISIF 219



 Score = 50.1 bits (118), Expect(2) = 1e-20
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = -2

Query: 95  LSFFYRRAQFGLRLDLIAFQTLLLALCRYKH 3
           +S FYRR +FGL ++LIAFQ+LL+ LCRYKH
Sbjct: 216 ISIFYRRQEFGLEMNLIAFQSLLMWLCRYKH 246


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score = 80.1 bits (196), Expect(2) = 2e-20
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = -1

Query: 306 WVSRGEHGREYLPGTGAYNEILDVLGKMKRFDELHQVLDEMSERKNGVFSEITYRIVVNR 127
           W SR      Y PG G +NEILD+LG+M+RF E+ Q+ DEMS+RK G+ +E T+ +++NR
Sbjct: 141 WASRCGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRK-GLVNERTFGVLLNR 199

Query: 126 YAAAHRLDEATEFF 85
           YAAAH+ +EA + F
Sbjct: 200 YAAAHKTEEAVKIF 213



 Score = 43.9 bits (102), Expect(2) = 2e-20
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -2

Query: 95  LSFFYRRAQFGLRLDLIAFQTLLLALCRYKH 3
           +  F +R   G  LDLIAFQTLL++LCRYKH
Sbjct: 210 VKIFNKRKGLGFELDLIAFQTLLMSLCRYKH 240


>ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330914|gb|EFH61333.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score = 80.1 bits (196), Expect(2) = 3e-19
 Identities = 38/64 (59%), Positives = 50/64 (78%)
 Frame = -1

Query: 276 YLPGTGAYNEILDVLGKMKRFDELHQVLDEMSERKNGVFSEITYRIVVNRYAAAHRLDEA 97
           Y+  +  YNEILDVLGKM+RF+E HQV+DEMS+R +G   E TY +++NRYAAAH++DEA
Sbjct: 133 YISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKR-DGFVDEKTYEVLLNRYAAAHKVDEA 191

Query: 96  TEFF 85
              F
Sbjct: 192 VGVF 195



 Score = 39.7 bits (91), Expect(2) = 3e-19
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -2

Query: 86  FYRRAQFGLRLDLIAFQTLLLALCRYKH 3
           F RR +FG+  DL+AF  LL+ LCRYKH
Sbjct: 195 FERRREFGIEDDLVAFHGLLMWLCRYKH 222