BLASTX nr result
ID: Angelica23_contig00029499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00029499
(639 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 110 2e-30
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 110 6e-30
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 108 9e-29
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 99 2e-26
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 99 6e-26
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 110 bits (274), Expect(2) = 2e-30
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 4/179 (2%)
Frame = +1
Query: 115 FLIAALQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLK-V*DKDTTCLLTYSAS 291
FL + L+++ FPS FI W+ ACV +SI N + + F K + D ++ S
Sbjct: 599 FLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALS 658
Query: 292 MNVLS-CLLNS-PNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSISHIMTSLDKFSN 465
M LS C+ N + F++H KC+ ++LTHL FADD+L+F+ D SIS IM + + FS
Sbjct: 659 MEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSK 718
Query: 466 WSGLKPSLHKSTSYLIN-CTPAVEQWFDKSFVIPRGQLLVNFLGVPLISAELSTNHCMP 639
SGL+ S+ KS Y C EQ D+ +P G L +LGVPL S +L+ + C P
Sbjct: 719 ASGLQASIEKSCIYFGGVCHEEAEQLADR-IQMPIGSLPFRYLGVPLASKKLNFSQCKP 776
Score = 48.5 bits (114), Expect(2) = 2e-30
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 2 DNVIMAQELFRGYNREIGVAKCALKIDLNKAFDSVLW 112
DN+++A EL RGYNR +C +K+D+ KA+DSV W
Sbjct: 561 DNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEW 597
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 110 bits (276), Expect(2) = 6e-30
Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
Frame = +1
Query: 115 FLIAALQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLKV*DKDTTCLLT---YS 285
FLI L+ +NFP F W+ C+ S++ N +F + + C L+ +
Sbjct: 499 FLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSAR--ELRQGCSLSPYLFV 556
Query: 286 ASMNVLSCLLNSP--NTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSISHIMTSLDKF 459
SM+VLS +L+ F YH KC+ + LTHL FADD+++ S G SI I+ L +F
Sbjct: 557 ISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEF 616
Query: 460 SNWSGLKPSLHKSTSYLINCTPAVEQWFDKSFVIPRGQLLVNFLGVPLISAELSTNHCMP 639
+ WSGLK S+ KST YL +V Q + F G+L V +LG+PL+S L+ + C+P
Sbjct: 617 AKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLP 676
Score = 45.8 bits (107), Expect(2) = 6e-30
Identities = 18/37 (48%), Positives = 30/37 (81%)
Frame = +2
Query: 2 DNVIMAQELFRGYNREIGVAKCALKIDLNKAFDSVLW 112
+NV++A E+ + Y+++ ++CALKID++KAFDSV W
Sbjct: 461 ENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQW 497
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 108 bits (270), Expect(2) = 9e-29
Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Frame = +1
Query: 115 FLIAALQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLKV*DKDTTCLLT---YS 285
FLI + FP FI W+ C+ S++ N FQ + C L+ +
Sbjct: 611 FLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSR--GLRQGCALSPYLFV 668
Query: 286 ASMNVLSCLLNSPNT--NFDYH*KCKELRLTHLFFADDVLLFSHGDKDSISHIMTSLDKF 459
M+VLS +L+ +F YH KCK + LTHL FADD+++ S G SI I+ D+F
Sbjct: 669 ICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEF 728
Query: 460 SNWSGLKPSLHKSTSYLINCTPAVEQWFDKSFVIPRGQLLVNFLGVPLISAELSTNHCMP 639
+ WSGL+ SL KST YL + F GQL V +LG+PLI+ LST C+P
Sbjct: 729 AKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLP 788
Score = 44.3 bits (103), Expect(2) = 9e-29
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +2
Query: 2 DNVIMAQELFRGYNREIGVAKCALKIDLNKAFDSVLW 112
+N+++A EL + Y+++ +CA+KID++KAFDSV W
Sbjct: 573 ENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQW 609
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 98.6 bits (244), Expect(2) = 2e-26
Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Frame = +1
Query: 115 FLIAALQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLK-V*DKDTTCLLTYSAS 291
FL L + FPSRF+ W+ CV +S+ N + FQ K + D ++
Sbjct: 596 FLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALC 655
Query: 292 MNVLSCLLNS--PNTNFDYH*KCKELRLTHLFFADDVLLFSHGDKDSISHIMTSLDKFSN 465
M LS L + +F++H KC+ L +THL FADD+L+F DK S+ H+ + KFS+
Sbjct: 656 MEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSH 715
Query: 466 WSGLKPSLHKSTSYLINCTPAVEQWFDKSFVIPRGQLLVNFLGVPLISAELSTNHCMP 639
SGL S KS Y + + G+L +LGVPL S +L+ C P
Sbjct: 716 ASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKP 773
Score = 46.6 bits (109), Expect(2) = 2e-26
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 2 DNVIMAQELFRGYNREIGVAKCALKIDLNKAFDSVLW 112
DN+++A EL RGY R+ +C +K+D+ KA+DSV W
Sbjct: 558 DNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEW 594
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 99.4 bits (246), Expect(2) = 6e-26
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Frame = +1
Query: 115 FLIAALQKVNFPSRFITWVKACVCNPMHSIKTNVL*MVIFQVLKV*DKDTTCLLT---YS 285
F+ L ++FP F+ W+ C+ S++ N + FQ + C L+ +
Sbjct: 138 FIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKR--GLRQGCSLSPYLFV 195
Query: 286 ASMNVLSCLLNSPNT--NFDYH*KCKELRLTHLFFADDVLLFSHGDKDSISHIMTSLDKF 459
SM+VLS LL+ + F YH +CKEL LTHL FADD+++ S G SI I+ D F
Sbjct: 196 MSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIF 255
Query: 460 SNWSGLKPSLHKSTSYLINCTPAVEQWFDKSFVIPRGQLLVNFLGVPLISAELSTNHCMP 639
+ +SGLK S+ KST YL T V + GQL V +LG+PL++ L+ P
Sbjct: 256 AKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSP 315
Score = 43.9 bits (102), Expect(2) = 6e-26
Identities = 17/37 (45%), Positives = 30/37 (81%)
Frame = +2
Query: 2 DNVIMAQELFRGYNREIGVAKCALKIDLNKAFDSVLW 112
+N+++A EL + Y++E ++CA+KID++KAF+SV W
Sbjct: 100 ENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQW 136