BLASTX nr result

ID: Angelica23_contig00029467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029467
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527649.1| hypothetical protein RCOM_1278130 [Ricinus c...    66   2e-08
ref|XP_002310510.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [...    64   7e-08
emb|CBI19970.3| unnamed protein product [Vitis vinifera]               62   2e-07

>ref|XP_002527649.1| hypothetical protein RCOM_1278130 [Ricinus communis]
           gi|223532954|gb|EEF34720.1| hypothetical protein
           RCOM_1278130 [Ricinus communis]
          Length = 886

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 50/127 (39%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
 Frame = +2

Query: 185 GLNDRVGRARVASFDHRNHEPCRSGT--------VPCKFFASGNCRNGKACRFSHDDQTR 340
           G ++ V R R +   HR+  P R G         VPCKFFA+GNCRNGK CRFSH  Q  
Sbjct: 253 GSSNEVTRERNSDRRHRDASPERHGDREIRRPADVPCKFFAAGNCRNGKYCRFSHQGQAL 312

Query: 341 DSFNNYEPNDYRQG----VDNRANMAPLREGSKWSGSASDLNLPKRHGNKNEGLGE--QR 502
            S     P   R G      N  ++  +  G KWS S S  +  K + +KN  +GE   R
Sbjct: 313 LS-----PERSRDGRFSHDQNADDIEKVWNGPKWS-STSTTDAVKLNEDKNGTVGELDHR 366

Query: 503 AMRSSVD 523
           A   SVD
Sbjct: 367 ATARSVD 373


>ref|XP_002310510.1| predicted protein [Populus trichocarpa] gi|222853413|gb|EEE90960.1|
           predicted protein [Populus trichocarpa]
          Length = 934

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 45/106 (42%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
 Frame = +2

Query: 191 NDRVGRARVASFDHR-NHEPCRSGTVPCKFFASGNCRNGKACRFSHDDQT-----RDSFN 352
           NDR  R R AS + R   E  R+  +PCKFFA+GNCRNGK CRFSH+DQT     R    
Sbjct: 287 NDR--RHRYASPERRAERETRRAADIPCKFFAAGNCRNGKYCRFSHNDQTPSPDKRSRDG 344

Query: 353 NYEPNDYRQGVDNRANMAPLREGSKWSGSASDLNLPKRHGNKNEGL 490
            + P+     V+   N        KWS S +  +  K   NKNE L
Sbjct: 345 RWPPSQNSDDVEKSWN------DPKWSESHTS-DAAKLSENKNEKL 383


>ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|222856469|gb|EEE94016.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +2

Query: 191 NDRVGRARVASFDHR-NHEPCRSGTVPCKFFASGNCRNGKACRFSHDDQTRDSFNNYEPN 367
           NDR  R R AS + R   E  R+  +PCKFFA+GNC+NGK CRFSH DQT  S +    +
Sbjct: 263 NDR--RRRYASPERRAERETSRAADIPCKFFAAGNCQNGKYCRFSHHDQTLASPDKRSRD 320

Query: 368 DYRQGVDNRANMAPLREGSKWSGSASDLNLPKRHGNKNEGL 490
                  N   +    +G KWS S +  +  K   +KNE L
Sbjct: 321 VRWPPSQNSDELEKSWKGPKWSDSHTS-DSAKFSEDKNEKL 360


>ref|XP_003602587.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355491635|gb|AES72838.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1084

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
 Frame = +2

Query: 206 RARVASFDHRN-HEPCRSGTVPCKFFASGNCRNGKACRFSHDDQ--------------TR 340
           R R  SF+H   H P R+   PCKFFASGNCRNGK CRFSHD Q              TR
Sbjct: 430 RHRDNSFEHGGRHVPNRTIDAPCKFFASGNCRNGKHCRFSHDTQACRSPIRRLRDDRWTR 489

Query: 341 DSFNNYEPNDYRQGVDNRANMAPLREGSKWSGSASDLNLPKR 466
           +   +++  D R+  D+ +    LR+  +W GS SD+  P R
Sbjct: 490 NPSRDHQMLDRRKLSDSISPNKRLRD-DRW-GSDSDMADPDR 529


>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
 Frame = +2

Query: 227 DH-RNHEPCRSGTVPCKFFASGNCRNGKACRFSHDDQTRDSFNNYEPNDYRQGVDNRANM 403
           DH R  EP R G + CK+FA G C NG  CRFSHDD   DS     P D + G +     
Sbjct: 438 DHERKREPHRVGGILCKYFAMGKCFNGDRCRFSHDDPPCDSPEG-RPRDGKWGHNLDDEN 496

Query: 404 APLREGSKWSGSASDLNLPKR-------HGNKN--EGLGEQRAMRSSVDASAPRDNRFMA 556
            P  E +KW+G+A+ L++ K        +GNKN  + +   +++ +S   S   +N+  A
Sbjct: 497 KPW-EDTKWNGAAA-LDIAKSSEWGSNDNGNKNFTDSMVADKSIGNSWGQSLDNENKPWA 554

Query: 557 HQMDIDEATKKD 592
                D+A++ D
Sbjct: 555 TSASKDKASEGD 566


Top