BLASTX nr result

ID: Angelica23_contig00029358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029358
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   161   5e-38
ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subun...   158   5e-37
ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   158   5e-37
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   151   6e-35
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   150   1e-34

>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus
           communis] gi|223543617|gb|EEF45146.1| chromatin assembly
           factor I P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/86 (86%), Positives = 82/86 (95%)
 Frame = -1

Query: 259 MRGGTVQINWHDTKPVLTLDFHPLSGLLATGGADFDIKLWLINSGEGEKKVPSASYHNSL 80
           M+GGTVQINWH TKPVLTLDFHP+SGLLATGGADFDIK+WLINSG+ EKK+P+AS+ NSL
Sbjct: 1   MKGGTVQINWHGTKPVLTLDFHPISGLLATGGADFDIKMWLINSGDAEKKIPTASFQNSL 60

Query: 79  SYHGSAVNALRFSPSGEELASGADGG 2
           SYH SAVNALRFSPSGE+LASGADGG
Sbjct: 61  SYHSSAVNALRFSPSGEQLASGADGG 86


>ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subunit FAS2-like [Cucumis
           sativus] gi|449530800|ref|XP_004172380.1| PREDICTED:
           chromatin assembly factor 1 subunit FAS2-like [Cucumis
           sativus]
          Length = 477

 Score =  158 bits (399), Expect = 5e-37
 Identities = 72/86 (83%), Positives = 82/86 (95%)
 Frame = -1

Query: 259 MRGGTVQINWHDTKPVLTLDFHPLSGLLATGGADFDIKLWLINSGEGEKKVPSASYHNSL 80
           M+GGT+QI+WHD+KPVLTLDFHP+SGLLATGGADFDIKLWL+NSGE +KKVP A+Y  SL
Sbjct: 1   MKGGTLQISWHDSKPVLTLDFHPISGLLATGGADFDIKLWLLNSGEEQKKVPGATYQTSL 60

Query: 79  SYHGSAVNALRFSPSGEELASGADGG 2
           SYHGSAVN+LRFSPSGE+LASGADGG
Sbjct: 61  SYHGSAVNSLRFSPSGEQLASGADGG 86


>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = -1

Query: 259 MRGGTVQINWHDTKPVLTLDFHPLSGLLATGGADFDIKLWLINSGEGEKKVPSASYHNSL 80
           MRGGTVQINWHDTKP+LTLDFHPLSG LATGGAD+DIKLWLINSGE +K+VP+ SY  SL
Sbjct: 1   MRGGTVQINWHDTKPILTLDFHPLSGTLATGGADYDIKLWLINSGEVQKEVPTVSYQTSL 60

Query: 79  SYHGSAVNALRFSPSGEELASGADGG 2
           SYHGSAVN LRFSP+GE+LASGADGG
Sbjct: 61  SYHGSAVNILRFSPTGEQLASGADGG 86


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/86 (80%), Positives = 78/86 (90%)
 Frame = -1

Query: 259 MRGGTVQINWHDTKPVLTLDFHPLSGLLATGGADFDIKLWLINSGEGEKKVPSASYHNSL 80
           M+GGT+QI+WHD KPVLTLDFHP+SGLLAT GAD+DIKLWLINSG+ EKKVPS SY +SL
Sbjct: 1   MKGGTIQISWHDGKPVLTLDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60

Query: 79  SYHGSAVNALRFSPSGEELASGADGG 2
           +YHG AVN +RFSPSGE LASGADGG
Sbjct: 61  TYHGCAVNTIRFSPSGELLASGADGG 86


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/86 (79%), Positives = 78/86 (90%)
 Frame = -1

Query: 259 MRGGTVQINWHDTKPVLTLDFHPLSGLLATGGADFDIKLWLINSGEGEKKVPSASYHNSL 80
           M+GGT+QI+WHD KPVLT+DFHP+SGLLAT GAD+DIKLWLINSG+ EKKVPS SY +SL
Sbjct: 1   MKGGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSL 60

Query: 79  SYHGSAVNALRFSPSGEELASGADGG 2
           +YHG AVN +RFSPSGE LASGADGG
Sbjct: 61  TYHGCAVNTIRFSPSGELLASGADGG 86


Top