BLASTX nr result

ID: Angelica23_contig00029336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029336
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox...   135   4e-30
ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chai...   135   4e-30
gb|AFK40375.1| unknown [Medicago truncatula]                          133   1e-29
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565...   132   2e-29
ref|XP_003618735.1| Ribulose bisphosphate carboxylase small chai...   132   3e-29

>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|3044116|gb|AAC13293.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Medicago sativa]
          Length = 180

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/69 (88%), Positives = 65/69 (94%)
 Frame = +1

Query: 1   ITSIASNGSRVNCMQVWPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELE 180
           ITSIASNG RVNCMQVWP  GKKKFETLSYLPPLT EQLA+EV+YL+RKGW+PCLEFELE
Sbjct: 45  ITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELE 104

Query: 181 KGFVYRENH 207
           KGFVYRENH
Sbjct: 105 KGFVYRENH 113


>ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|217071562|gb|ACJ84141.1| unknown [Medicago
           truncatula] gi|355493751|gb|AES74954.1| Ribulose
           bisphosphate carboxylase small chain [Medicago
           truncatula]
          Length = 180

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/69 (89%), Positives = 65/69 (94%)
 Frame = +1

Query: 1   ITSIASNGSRVNCMQVWPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELE 180
           ITSIASNG RVNCMQVWP  GKKKFETLSYLPPLT EQLA+EV+YL+RKGWVPCLEFELE
Sbjct: 45  ITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEFELE 104

Query: 181 KGFVYRENH 207
           KGFVYRENH
Sbjct: 105 KGFVYRENH 113


>gb|AFK40375.1| unknown [Medicago truncatula]
          Length = 180

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/69 (88%), Positives = 64/69 (92%)
 Frame = +1

Query: 1   ITSIASNGSRVNCMQVWPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELE 180
           ITSIASNG RVNCMQVWP  GKKKFETLSYLPPLT EQL +EV+YL+RKGWVPCLEFELE
Sbjct: 45  ITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTEEQLVKEVEYLIRKGWVPCLEFELE 104

Query: 181 KGFVYRENH 207
           KGFVYRENH
Sbjct: 105 KGFVYRENH 113


>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
           [Lotus japonicus]
          Length = 177

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/69 (88%), Positives = 64/69 (92%)
 Frame = +1

Query: 1   ITSIASNGSRVNCMQVWPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELE 180
           ITSIASNG RVNCMQVWP  GKKKFETLSYLPPLT EQLA+EV+YL+RKGWVPCLEFE E
Sbjct: 42  ITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTVEQLAKEVEYLIRKGWVPCLEFETE 101

Query: 181 KGFVYRENH 207
           KGFVYRENH
Sbjct: 102 KGFVYRENH 110


>ref|XP_003618735.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355493750|gb|AES74953.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
          Length = 177

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +1

Query: 1   ITSIASNGSRVNCMQVWPTQGKKKFETLSYLPPLTPEQLAREVDYLLRKGWVPCLEFELE 180
           ITSI SNG RVNCMQVWP  GKKKFETLSYLPPLT +QLA+EV+YL+RKGWVPCLEFELE
Sbjct: 42  ITSITSNGGRVNCMQVWPPIGKKKFETLSYLPPLTEDQLAKEVEYLIRKGWVPCLEFELE 101

Query: 181 KGFVYRENH 207
           KGFVYRENH
Sbjct: 102 KGFVYRENH 110


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