BLASTX nr result

ID: Angelica23_contig00029318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029318
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97402.1| retrotransposon protein, putative, unclassified [...    80   8e-13
gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japo...    80   8e-13
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         78   4e-12
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
gb|EEC78788.1| hypothetical protein OsI_19034 [Oryza sativa Indi...    75   3e-11

>gb|ABA97402.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 692

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
 Frame = -2

Query: 466 PSGASILNTPLNFMQ------PQFHQLVGNQQYNQG--WPPHNDQTNPRP---------- 341
           P    I +TP +F +      P+ +    N  Y+Q    PPH+ Q NP P          
Sbjct: 120 PHVPPISSTPTHFWEGGHGAHPEPYHQPYNPYYHQEPFHPPHHHQYNPEPHHPHYEHRPH 179

Query: 340 FLQPQYKFPKMDFPRFNRTNARGWLSKADKFFLLNPVMDSTTKVIYAALYLDDEADYWYQ 161
           +  P  +   +DFP F       W+ KA+K+F L    +   KV+ A +++   AD W +
Sbjct: 180 YADPAKRSRNVDFPTFEGDYLESWIRKAEKYFSLYQTPEED-KVLLAEVHISGRADQWIE 238

Query: 160 TVQAEYPGLGWEAFTSLLLRRFSSFDQGNLIGKFNKLTQTGSVDNYIAQFEE 5
           ++      L W  F ++L +RF++  +  +   F  L Q GSVD+YI +FE+
Sbjct: 239 SLAIATASLSWPEFKTMLCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFED 290


>gb|EEE62873.1| hypothetical protein OsJ_17676 [Oryza sativa Japonica Group]
          Length = 463

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
 Frame = -2

Query: 466 PSGASILNTPLNFMQ------PQFHQLVGNQQYNQG--WPPHNDQTNPRP---------- 341
           P    I +TP +F +      P+ +    N  Y+Q    PPH+ Q NP P          
Sbjct: 120 PHVPPISSTPTHFWEGGHGAHPEPYHQPYNPYYHQEPFHPPHHHQYNPEPHHPHYEHRPH 179

Query: 340 FLQPQYKFPKMDFPRFNRTNARGWLSKADKFFLLNPVMDSTTKVIYAALYLDDEADYWYQ 161
           +  P  +   +DFP F       W+ KA+K+F L    +   KV+ A +++   AD W +
Sbjct: 180 YADPAKRSRNVDFPTFEGDYLESWIRKAEKYFSLYQTPEED-KVLLAEVHISGRADQWIE 238

Query: 160 TVQAEYPGLGWEAFTSLLLRRFSSFDQGNLIGKFNKLTQTGSVDNYIAQFEE 5
           ++      L W  F ++L +RF++  +  +   F  L Q GSVD+YI +FE+
Sbjct: 239 SLAIATASLSWPEFKTMLCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFED 290


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
 Frame = -2

Query: 466 PSGASILNTPLNFMQ------PQFHQLVGNQQYNQG--WPPHNDQTNPRPF--------- 338
           P    I +TP +F +      P+ +    N  Y+Q    PPH+ Q NP P          
Sbjct: 220 PHVPPISSTPTHFWEGGHGAHPEPYHQPYNPYYHQEPFHPPHHHQYNPEPHHTNYAHRPH 279

Query: 337 -LQPQYKFPKMDFPRFNRTNARGWLSKADKFFLLNPVMDSTTKVIYAALYLDDEADYWYQ 161
              P  +   +DFP F       W+ KA+K+F L    +   KV+ A +++   AD W +
Sbjct: 280 SADPAKRSRNVDFPTFEGDYPESWIRKAEKYFSLYQTPEED-KVLLAEVHISGRADQWIE 338

Query: 160 TVQAEYPGLGWEAFTSLLLRRFSSFDQGNLIGKFNKLTQTGSVDNYIAQFEE 5
           +       L W  F +++ +RF++  +  +   F  L Q GSVD+YI +FEE
Sbjct: 339 SSAVPTASLSWPEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEE 390


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = -2

Query: 319 FPKMDFPRFNRTNARGWLSKADKFFLLNPVMDSTTKVIYAALYLDDEADYWYQTVQAEYP 140
           FP+MD   F   N RGWL + +KFF LN        V  A+LYL+ +A+ W++       
Sbjct: 103 FPRMDLTTFRGDNPRGWLRRCNKFFKLN-ATPWQQWVEIASLYLEGKAEIWFEGYMCGLD 161

Query: 139 -GLGWEAFTSLLLRRFSSFDQGNLIGKFNKLTQTGSVDNYIAQFEEL 2
             L WE F+  +  RF S D  +++ +FNKLTQ G ++ Y+ +FEEL
Sbjct: 162 VSLEWEEFSKAICSRFGSRD--DIVEEFNKLTQEGGMEEYVERFEEL 206


>gb|EEC78788.1| hypothetical protein OsI_19034 [Oryza sativa Indica Group]
          Length = 557

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
 Frame = -2

Query: 373 PPHNDQTNPRPFL-----QPQYKFP-----KMDFPRFNRTNARGWLSKADKFFLLNPVMD 224
           PPH+ Q NP P       +P Y  P      +DFP F       W+ KA K+F L    +
Sbjct: 241 PPHHHQYNPEPHHPHYEHRPHYADPAKCSRNVDFPTFEGDYPESWIRKAKKYFSLYQTPE 300

Query: 223 STTKVIYAALYLDDEADYWYQTVQAEYPGLGWEAFTSLLLRRFSSFDQGNLIGKFNKLTQ 44
              KV+ A +++   AD W ++       L W  F +++ +RF++  +  +   F  L Q
Sbjct: 301 ED-KVLLAEVHISGRADQWIESSAIATASLSWPEFKTMVCQRFAAKSKIEITETFRNLKQ 359

Query: 43  TGSVDNYIAQFEE 5
            GSVD+YI +FEE
Sbjct: 360 YGSVDSYIDKFEE 372


Top