BLASTX nr result

ID: Angelica23_contig00029284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029284
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata] g...   125   5e-27
dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]                      125   5e-27

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/96 (61%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +3

Query: 135 CAKPNSDEAFKPKKQVS-VDYDKGTHQVSVHLSGLRKEHLPKYQRLRVDGDKFQKDWAIS 311
           C +  S  A + KK+V  VDYD G HQVS H+SGLRK  +PK+ RLRV+ D+FQKDW++S
Sbjct: 39  CKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQKDWSVS 98

Query: 312 EVVVKIMKMKHWEDIEGLLNRWAGRFARKNFPVLIR 419
           EVV +++K+ HW+D+EGLLNRW GRF+RKNFP+LIR
Sbjct: 99  EVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIR 134


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/96 (61%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +3

Query: 135 CAKPNSDEAFKPKKQVS-VDYDKGTHQVSVHLSGLRKEHLPKYQRLRVDGDKFQKDWAIS 311
           C +  S  A + KK+V  VDYD G HQVS H+SGLRK  +PK+ RLRV+ D+FQKDW++S
Sbjct: 39  CKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQKDWSVS 98

Query: 312 EVVVKIMKMKHWEDIEGLLNRWAGRFARKNFPVLIR 419
           EVV +++K+ HW+D+EGLLNRW GRF+RKNFP+LIR
Sbjct: 99  EVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIR 134


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/107 (55%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
 Frame = +3

Query: 108 PIKILFKP--ICAKPNSDEAFKPKKQVSVDYDKGTHQVSVHLSGLRKEHLPKYQRLRVDG 281
           P    FKP  +C    SD AF+ KK   VDYDKG H VS  +SG+RK+ +P+  R+RV G
Sbjct: 1   PTPPAFKPKILCKNSKSDAAFEEKKSGFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQG 60

Query: 282 DKFQKDWAISEVVVKIMKMKH-WEDIEGLLNRWAGRFARKNFPVLIR 419
           D+FQKDW++S+VV K++++ H  +D+EGLLNRW GRFARKNFP+LI+
Sbjct: 61  DRFQKDWSVSQVVQKVLELDHKSDDVEGLLNRWVGRFARKNFPLLIK 107


>ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
           gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  125 bits (313), Expect = 5e-27
 Identities = 53/92 (57%), Positives = 74/92 (80%)
 Frame = +3

Query: 150 SDEAFKPKKQVSVDYDKGTHQVSVHLSGLRKEHLPKYQRLRVDGDKFQKDWAISEVVVKI 329
           + EAF+ KK VSV+YD+G H+VS+ + GLRK  +P+  R+RV+ D+FQKDW++SEVV ++
Sbjct: 26  TSEAFQEKKSVSVNYDRGEHEVSIRVGGLRKADIPRRYRIRVENDRFQKDWSVSEVVDRL 85

Query: 330 MKMKHWEDIEGLLNRWAGRFARKNFPVLIRVL 425
           M +  WE+++G+LN W GRFARKNFPVLIR L
Sbjct: 86  MALNRWEEVDGVLNSWVGRFARKNFPVLIREL 117


>dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
          Length = 815

 Score =  125 bits (313), Expect = 5e-27
 Identities = 53/92 (57%), Positives = 75/92 (81%)
 Frame = +3

Query: 150 SDEAFKPKKQVSVDYDKGTHQVSVHLSGLRKEHLPKYQRLRVDGDKFQKDWAISEVVVKI 329
           + +AF+ KK VSV+YD+G H+VSV++ GLRK  +P+  R+RV+ D+FQKDW++SEVV ++
Sbjct: 26  ASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVENDRFQKDWSVSEVVDRL 85

Query: 330 MKMKHWEDIEGLLNRWAGRFARKNFPVLIRVL 425
           M +  WE+++G+LN W GRFARKNFPVLIR L
Sbjct: 86  MALNRWEEVDGVLNSWVGRFARKNFPVLIREL 117


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