BLASTX nr result

ID: Angelica23_contig00029274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029274
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       103   1e-20
emb|CBI28269.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...    96   2e-18
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...    96   2e-18
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...    92   4e-17

>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/99 (55%), Positives = 66/99 (66%)
 Frame = -3

Query: 298 LRSTMGPIDVYLVSQFEEKFEEINGVEXXXXXXXXXXXVTECQAIIVAPEESRENVTDMQ 119
           LRSTMGPIDVYLVSQFEEKFEEI+G E             +      A EE+R++ T MQ
Sbjct: 303 LRSTMGPIDVYLVSQFEEKFEEISGAEPPPSIPSTSGYNEDTTT--AAKEENRDDETKMQ 360

Query: 118 GQETRSIYPNENESHDIVNGIMKIVPDVNNDADYWLSTD 2
           GQET  I  + N   D V+GIMKIVP+V++DADYWL +D
Sbjct: 361 GQETHRICSDANAQQDFVSGIMKIVPEVDSDADYWLLSD 399


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 LRSTMGPIDVYLVSQFEEKFEEINGVEXXXXXXXXXXXVTECQAIIVAPEESRENVTDMQ 119
           LRS+MGPIDVYLVSQFEEKFEEING+E             +  A +V  EESR    ++Q
Sbjct: 292 LRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVT-EESRGKEIEIQ 350

Query: 118 GQETRSIYPNENESHDIVNGIMKIVP-DVNNDADYWLSTD 2
           GQ+   +  + N S D V+GIMKIVP DV++DADYWL +D
Sbjct: 351 GQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSD 390


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 LRSTMGPIDVYLVSQFEEKFEEINGVEXXXXXXXXXXXVTECQAIIVAPEESRENVTDMQ 119
           LRS+MGPIDVYLVSQFEEKFEEING+E             +  A +V  EESR    ++Q
Sbjct: 303 LRSSMGPIDVYLVSQFEEKFEEINGLEAPPSFPSSSGYNEDPTAAMVT-EESRGKEIEIQ 361

Query: 118 GQETRSIYPNENESHDIVNGIMKIVP-DVNNDADYWLSTD 2
           GQ+   +  + N S D V+GIMKIVP DV++DADYWL +D
Sbjct: 362 GQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYWLLSD 401


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/99 (55%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 RSTMGPIDVYLVSQFEEKFEEINGVEXXXXXXXXXXXVTECQAIIVAPEESRENVTDMQG 116
           RSTMGPIDVYLVSQFEEKFE+I G E             E  A  +  EESR    +MQ 
Sbjct: 321 RSTMGPIDVYLVSQFEEKFEDIQGAE-PPPSDSSTSGFNENAATTMVTEESRAKEFEMQE 379

Query: 115 QETRSIYPNENESHDIVNGIMKIVP-DVNNDADYWLSTD 2
           Q+   I    N SHD V+GIMKIVP DVN+DADYWL +D
Sbjct: 380 QDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSD 418


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 LRSTMGPIDVYLVSQFEEKFEEINGVEXXXXXXXXXXXVTECQAIIVAPEESRENVTDMQ 119
           LRSTMGPIDVYLVSQFEEK E+I GVE             E  A  +  EESR    +MQ
Sbjct: 301 LRSTMGPIDVYLVSQFEEKIEDIQGVE-PPPSYPSTSGFNENPATTMTMEESRGKEVEMQ 359

Query: 118 GQETRSIYPNENESHDIVNGIMKIVP-DVNNDADYWLSTD 2
            Q+   +    N +HD V+GIMKIVP DV++DADYWL +D
Sbjct: 360 EQDGHRMCSELNTAHDFVSGIMKIVPSDVDSDADYWLLSD 399


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