BLASTX nr result

ID: Angelica23_contig00029261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029261
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24939.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...    75   4e-12
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = -2

Query: 275 VDKMRELFSEMKETKCLPDNITFSTMIEVYNAQGMVEAAQELERKMITAKPNSAKKLIRC 96
           V++M ELF  MKE KC PDNITF+TMI+ YNAQGM+EAAQ LE  MIT K  S  +LI C
Sbjct: 426 VERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTRLIGC 485


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = -2

Query: 275 VDKMRELFSEMKETKCLPDNITFSTMIEVYNAQGMVEAAQELERKMITAKPNS 117
           VDKM ELF EM+E +C+PDN+TF+TMI+ Y  QGM EAAQ LE+ M+ AK NS
Sbjct: 426 VDKMAELFLEMRERECMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAAKGNS 478


>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = -2

Query: 275 VDKMRELFSEMKETKCLPDNITFSTMIEVYNAQGMVEAAQELERKMITAKPNSAKK 108
           V++M ELF  MKE KC PDNITF+TMI+ YNAQGM+EAAQ LE  MIT K  S  +
Sbjct: 426 VERMGELFLVMKERKCKPDNITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSGTR 481


>ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Glycine max]
          Length = 481

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/58 (60%), Positives = 40/58 (68%)
 Frame = -2

Query: 269 KMRELFSEMKETKCLPDNITFSTMIEVYNAQGMVEAAQELERKMITAKPNSAKKLIRC 96
           KM ELF  M+E KC PDNITF+ MI+ YN QGM EA Q LE  MI+AK +   KLI C
Sbjct: 424 KMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMISAKSSLGTKLIGC 481


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = -2

Query: 275 VDKMRELFSEMKETKCLPDNITFSTMIEVYNAQGMVEAAQELERKMITAKPNSAKK 108
           ++KM ELF  M+  KC PD+ITF+TMI+ YNAQGM+EAAQ +E  MI  + NS  +
Sbjct: 413 IEKMSELFLGMEGRKCKPDSITFATMIQAYNAQGMIEAAQGMENMMIATRKNSGMR 468


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