BLASTX nr result

ID: Angelica23_contig00029242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029242
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...   103   1e-20
ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    91   1e-16
gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]             87   2e-15
ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabido...    87   2e-15

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/108 (51%), Positives = 71/108 (65%)
 Frame = -3

Query: 333 LFGSLKFYFSGDFDSGLISDLKTLVLAAGGTLLVKKGHLVSQICVAKKTSKTLVVYNADH 154
           LF  L FYF+GDF SG   DL+ LVLAAGGT+L  K  +V Q       S+TLVVYN D 
Sbjct: 622 LFSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKVVEQSHNEATPSRTLVVYNFDP 681

Query: 153 IDRCTSGDEDSRVLEILETAEDLALRIGSRIVKHTWILESIAACKLQP 10
              C  G+E + + + L  AEDLA +IGS+++ HTW+LESIA+ K QP
Sbjct: 682 PLGCKLGEEVTILWQRLSEAEDLAAKIGSQVIAHTWLLESIASYKFQP 729


>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/107 (45%), Positives = 67/107 (62%)
 Frame = -3

Query: 333 LFGSLKFYFSGDFDSGLISDLKTLVLAAGGTLLVKKGHLVSQICVAKKTSKTLVVYNADH 154
           LF  L F F GDF +G    L++LV+AAGGTLL  +  LV Q       S TL+VYN D 
Sbjct: 274 LFSGLSFCFVGDFVAGYKEGLQSLVIAAGGTLLKSEEELVEQRHEPLSPSTTLIVYNLDP 333

Query: 153 IDRCTSGDEDSRVLEILETAEDLALRIGSRIVKHTWILESIAACKLQ 13
              C  G+E S + +    A+DLA ++GS+++ HTW+LESI++ KLQ
Sbjct: 334 PQGCKLGEEVSIIWQRTNEAQDLAAKVGSQVIGHTWLLESISSYKLQ 380


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 678

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
 Frame = -3

Query: 333 LFGSLKFYFSGDFDSGLISDLKTLVLAAGGTLLVKKGHLVSQICVAK-KTSKTLVVYNAD 157
           LF  LKFYFSGD+ S    DL+ L+   GGT+L  K  L SQ    K  +S+ L+VYN D
Sbjct: 568 LFNGLKFYFSGDYVSTYKEDLEELIEVGGGTVLRSKEELESQRHECKGDSSQLLIVYNLD 627

Query: 156 HIDRCTSGDEDSRVLEILETAEDLALRIGSRIVKHTWILESIAACKLQP 10
               C  G+E S + + L  AEDLA     +++ HTWILESIAACKLQP
Sbjct: 628 PPQGCKLGEEVSILWQRLNDAEDLAANT-LQVIGHTWILESIAACKLQP 675


>gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = -3

Query: 333 LFGSLKFYFSGDFDSGLISDLKTLVLAAGGTLLVKKGHLVSQIC--VAKKTSKTLVVYNA 160
           LF  LKFYF GDF  G   DL+ LV  AGGT+L  +  L ++    V  + S ++VVYN 
Sbjct: 615 LFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNI 674

Query: 159 DHIDRCTSGDEDSRVLEILETAEDLALRIGSRIVKHTWILESIAACKLQPL 7
           D    C  G+E + + +    AE LA + GSR+V HTW+LESIA  KL P+
Sbjct: 675 DPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKLHPV 725


>ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
           gi|332189526|gb|AEE27647.1| BRCA1-associated RING domain
           protein 1 [Arabidopsis thaliana]
          Length = 714

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = -3

Query: 333 LFGSLKFYFSGDFDSGLISDLKTLVLAAGGTLLVKKGHLVSQIC--VAKKTSKTLVVYNA 160
           LF  LKFYF GDF  G   DL+ LV  AGGT+L  +  L ++    V  + S ++VVYN 
Sbjct: 602 LFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNI 661

Query: 159 DHIDRCTSGDEDSRVLEILETAEDLALRIGSRIVKHTWILESIAACKLQPL 7
           D    C  G+E + + +    AE LA + GSR+V HTW+LESIA  KL P+
Sbjct: 662 DPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKLHPV 712


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