BLASTX nr result

ID: Angelica23_contig00029218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029218
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]     71   2e-10
gb|ABO92989.1| F-box domain-containing protein [Solanum tuberosum]     71   2e-10
ref|XP_004171893.1| PREDICTED: F-box protein CPR30-like [Cucumis...    70   6e-10
ref|XP_004167623.1| PREDICTED: F-box protein CPR30-like [Cucumis...    69   8e-10
ref|XP_003598348.1| F-box/kelch-repeat protein [Medicago truncat...    66   7e-09

>gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 424

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
 Frame = +3

Query: 6   DVYIWNPSIRQYKKLPATKRNYAITVKIGFGYYSVSDVYKVF------RAVCEKLDDEVL 167
           D YIWNP+IR+ KKLP +    +   K GFG+    D YKV        +   +L +  +
Sbjct: 148 DTYIWNPTIRKSKKLPKSSWGTSCYTKYGFGFDDSRDDYKVLFIDHCGNSYNGELSNTRV 207

Query: 168 IVQVYSTGTDSWREFWEPVLRSNEVYDSTSVVVDGLLYFYGAHG-------RLISFDLHR 326
           +V +YS+ TDSW    +  L+   + + +   ++G +Y+  + G        +ISFD+  
Sbjct: 208 VVNIYSSRTDSWTTLHDQ-LQGIFLLNYSGKFINGKIYWAASTGIHDCNVRNIISFDVAD 266

Query: 327 DVFGVVQLPSSS----SIERGSDVLNYQGSVAMVFQIGRERNLWTLDHVSGKVSWTKRFS 494
           + +G ++LP       +I+ G  V+    SV    + G   ++W L      VSW K F+
Sbjct: 267 ETWGSLELPICGEEVFNIKLG--VVENDLSVLYTCKPGTTSDVWILKDCRVNVSWMKWFT 324

Query: 495 TD 500
            +
Sbjct: 325 IE 326


>gb|ABO92989.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 404

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
 Frame = +3

Query: 6   DVYIWNPSIRQYKKLPATKRNYAITVKIGFGYYSVSDVYKVF------RAVCEKLDDEVL 167
           D YIWNP+IR+ KKL  +    +   K GFGY    D YK         +   +L +  +
Sbjct: 148 DTYIWNPAIRKSKKLVKSSWGTSCYTKYGFGYDDSRDDYKALFIDHCGNSYNGELSNTRV 207

Query: 168 IVQVYSTGTDSWREFWEPVLRSNEVYDSTSVVVDGLLYFYGAHG-------RLISFDLHR 326
           +V +YS+ TDSW    +  L+   + +     ++G +Y+  + G        +ISFD+  
Sbjct: 208 VVNIYSSRTDSWITVHDQ-LQGIFLLNYLGKFINGKIYWAASTGIHDYNVSNIISFDVAD 266

Query: 327 DVFGVVQLPSSS----SIERGSDVLNYQGSVAMVFQIGRERNLWTLDHVSGKVSWTKRFS 494
           + +G ++LP       +I+ G  V+  + SV     +G   ++W L      VSW KRF+
Sbjct: 267 ETWGSLELPICGEEVFNIKLG--VVENELSVLYTCNLGTTSDVWILKDCRVNVSWMKRFT 324

Query: 495 TD 500
            +
Sbjct: 325 IE 326


>ref|XP_004171893.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 390

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 36/276 (13%)
 Frame = +3

Query: 3   NDVYIWNPSIRQYKKLPAT----KRNY--------AITVKIGFGYYSVSDVYKVFRAV-C 143
           +DV++ NP  RQ++KLP +    +  Y        A+    GFGY + S  +KV R V C
Sbjct: 112 DDVFLINPMTRQFRKLPPSILIVRGGYYDDPDFYSAVPFTTGFGYGAKSSNFKVVRIVSC 171

Query: 144 EKLDDEVLIVQVYSTGTDSWREFWEPVLRSNEVY-DSTSVVVDGLLYFYG---------A 293
               +  + V++Y    D WRE   P+   N  +  S  +  +G+ Y++G          
Sbjct: 172 RGPTEFTMRVEIYDLNKDKWREIEAPMFCGNARFIPSFLMYHEGIFYWWGEGESSSSDFE 231

Query: 294 HGRLISFDLHRDVFGVVQLPSSSSIERGSDVLNYQGSVAMVF---------QIGRER--- 437
              +I+FD++ +VF  + LP      +    L       ++F          IG +    
Sbjct: 232 GNHIITFDMNEEVFDKISLPGGYDERKHKTSLRVLNRSIVLFIYPYKSNETNIGTDETNI 291

Query: 438 NLWTLDHVS-GKVSWTKRFSTDSDDLVDLEIKMWISQYLGAGKFYADKFVDLYNRLIFSG 614
           ++W ++    G VSW K  + D     ++E  +    Y       ++  V +YN    + 
Sbjct: 292 DIWEMEKDEYGVVSWLKLLTIDPP--FEVEHPLLFVSYEELLMESSEGHVIMYN----TK 345

Query: 615 DLLFDSVKKKGNVYTLPERRVSAPFKYIETLVSLDG 722
             LF  +  +G+V  +   R  A   +IE+LVS++G
Sbjct: 346 TQLFKKLSIEGDVTYVKPHRFEAHDLFIESLVSVEG 381


>ref|XP_004167623.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 381

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 28/268 (10%)
 Frame = +3

Query: 3   NDVYIWNPSIRQYKKLPATKRNY------------AITVKIGFGYYSVSDVYKVFRAV-C 143
           +D ++ NP  RQ+ KLP +   +            AI   IGFGY + S  +KV R V C
Sbjct: 112 DDAFLVNPMTRQFHKLPPSILIFRGCHHDDPDYYSAIPFTIGFGYDAKSSDFKVVRIVSC 171

Query: 144 EKLDDEVLIVQVYSTGTDSWREFWEPVLRSNEVY-DSTSVVVDGLLYFYGAHGR------ 302
                  + V++Y    D WRE   P L  N  +  S  +  +G+ Y++G +G       
Sbjct: 172 RGQAKSSMRVEIYDLSKDKWREIEAPDLCGNARFIPSFDMCHEGIFYWWG-YGEPRINEV 230

Query: 303 --LISFDLHRDVFGVVQLPSSSSIERGSDVLNYQGSVAMVFQIGRERN-----LWTLD-H 458
             +I+FD+  ++FG + LP S +  +    L       ++F    E N     +W ++  
Sbjct: 231 DSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIILFVYPFESNETNIDIWEMEKD 290

Query: 459 VSGKVSWTKRFSTDSDDLVDLEIKMWISQYLGAGKFYADKFVDLYNRLIFSGDLLFDSVK 638
            S  VSW+K  + D    V+  +     + L      ++  V +YN    +   LF  + 
Sbjct: 291 ESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMES--SEGHVIMYN----TATQLFKKLP 344

Query: 639 KKGNVYTLPERRVSAPFKYIETLVSLDG 722
            +G+V      R  A   +IE+L+ ++G
Sbjct: 345 IEGDVTYAKPHRFEAHDLFIESLLPVEG 372


>ref|XP_003598348.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487396|gb|AES68599.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 386

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
 Frame = +3

Query: 12  YIWNPSIRQYKKLPATKRNYAITVKIGFGYYSVSDVYKVFRAVCEKLDDEVLIVQVYSTG 191
           ++WNPSIR++K LP  + +     +I FGY    D YKV     E        V VY+ G
Sbjct: 156 FLWNPSIRKFKLLPPLENSRGHVFQISFGYDHFIDDYKVIGVSSEN------EVSVYTLG 209

Query: 192 TDSWREFWEPVLRSNEVYDSTSVVVDGLLYFYGAHGR-LISFDLHRDVFGVVQLPSSSSI 368
           TD W    + +  S+ +Y    V V G + +       ++S DL ++ +  + LP   + 
Sbjct: 210 TDYWTRI-KDIPYSDPIY-GNGVFVSGTVNWLACDDSCILSLDLEKESYQQLFLPDFEN- 266

Query: 369 ERGSDVLNYQGSVAMVF-QIGRERNLWTLDHVSGKVSWTKRFS 494
           E  S +L+       VF  I R  N+W +     + SWTK +S
Sbjct: 267 ENDSLILSVLRDCLCVFATIDRILNVWIMKEYGNRESWTKLYS 309


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