BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029103
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   246   4e-63
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ...   228   1e-57
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   227   2e-57
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56

>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  246 bits (627), Expect = 4e-63
 Identities = 120/208 (57%), Positives = 153/208 (73%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
           P+KALLDTA+GAYVQ G P  A Q+F +M +L+ RP            V    +  S+  
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS-HSVSF 191

Query: 208 CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
            +   ND+I+LG+  + +TFNI+I GYCL NKF +A+E L  MG+Y+C PD+VT+NT+LD
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 388 ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
           ALCKK RL +ARDLL DMK+RGLLP+RNTYNILV GYCKMGWL +AA VIELM+ N + P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 568 DLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
           D+WTYN LI+GLC+EGRI+E  +LR EM
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEM 339



 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/130 (41%), Positives = 78/130 (60%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
           T+N+LING C   +  EA +L   M     LPD V++NTL++   + +++SEA  LL +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 442 KNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGRI 621
             +G+ P+  T+NI+V+ YCK G + DA+  I  M  +G  PD  TYNTLI+G C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 622 DEGLRLRVEM 651
            E  R   EM
Sbjct: 435 GEAFRTMDEM 444



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 55/158 (34%), Positives = 75/158 (47%)
 Frame = +1

Query: 178 KSENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLP 357
           K  NVD  L   ++ ++     +  ST T+N +I G C   K  +A+  L  + E   LP
Sbjct: 500 KDGNVDRAL---KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 358 DSVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVI 537
           D  T+NT+L   C++  + +A      M      P   T NIL+RG C  G L  A K+ 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616

Query: 538 ELMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
                 G   D  TYNTLI  LC EGR+D+   L  EM
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 56/204 (27%), Positives = 96/204 (47%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
           P +   +  V  Y + G+   A  V + MT+    P             N+    ++  +
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335

Query: 208 CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              + N    L +     ++N LING    +K SEA +LL  M E    P++VT N ++ 
Sbjct: 336 RDEMEN----LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVK 391

Query: 388 ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
             CK+ ++ +A + +T M+  G  P   TYN L+ GYCK G + +A + ++ M    +  
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451

Query: 568 DLWTYNTLIDGLCSEGRIDEGLRL 639
           D  T NT++  LC E +++E  +L
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKL 475



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 48/131 (36%), Positives = 68/131 (51%)
 Frame = +1

Query: 241 GVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEA 420
           G S    T+N LINGYC      EA   +  MG  +   DSVT NT+L  LC++ +L EA
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 421 RDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDG 600
             LL+  + RG      +Y  L+ GY K G +  A K+ + M    + P   TYN +I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 601 LCSEGRIDEGL 633
           LC  G+ ++ +
Sbjct: 533 LCQCGKTEQAI 543



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/142 (30%), Positives = 77/142 (54%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           ++++ + + G  +   ++  LI GY        A++L   M E + +P +VT+N ++  L
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
           C+  +  +A   L ++   GLLP   TYN ++ GYC+ G +  A +    M  N   PD+
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 574 WTYNTLIDGLCSEGRIDEGLRL 639
           +T N L+ GLC EG +++ L+L
Sbjct: 594 FTCNILLRGLCMEGMLEKALKL 615



 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 44/136 (32%), Positives = 65/136 (47%)
 Frame = +1

Query: 220 VNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCK 399
           +N+ +  G+    +T+N +++GYC      +A +    M E    PD  T N LL  LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 400 KNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWT 579
           +  L +A  L     ++G      TYN L+   CK G L DA  ++  M    + PD +T
Sbjct: 606 EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 580 YNTLIDGLCSEGRIDE 627
           YN +I  L   GRI E
Sbjct: 666 YNAIITALTDSGRIRE 681



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 43/146 (29%), Positives = 70/146 (47%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           +++ +    GV  +  T NI++  YC   K  +A   +  M E    PD VT+NTL++  
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
           CK   + EA   + +M  + +     T N ++R  C+   L +A K++      G   D 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 574 WTYNTLIDGLCSEGRIDEGLRLRVEM 651
            +Y TLI G   +G +D  L+L  EM
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEM 514



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 23/227 (10%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
            P+    +  +G   QCG    A    + + +    P           +  + +   +   
Sbjct: 521  PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 208  CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              ++V +S +  V     T NIL+ G C+     +A++L  +        D+VT+NTL+ 
Sbjct: 581  HNKMVENSFKPDVF----TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 388  ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
            +LCK+ RL +A +LL++M+ + L P   TYN ++      G + +A + +  M   G  P
Sbjct: 637  SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696

Query: 568  -----------------------DLWTYNTLIDGLCSEGRIDEGLRL 639
                                       Y+  I  LC+EG+  + +R+
Sbjct: 697  XQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  244 bits (623), Expect = 1e-62
 Identities = 119/208 (57%), Positives = 152/208 (73%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
           P+KALLDTA+GAYVQ G P  A Q+F +M +L+ RP            V    +  S+  
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSS-HSVSF 191

Query: 208 CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
            +   ND+I+LG+  + +TFNI+I GYCL NKF +A+E L  MG+Y+C PD+VT+NT+LD
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 388 ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
            LCKK RL +ARDLL DMK+RGLLP+RNTYNILV GYCKMGWL +AA VIELM+ N + P
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 568 DLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
           D+WTYN LI+GLC+EGRI+E  +LR EM
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEM 339



 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/130 (41%), Positives = 78/130 (60%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
           T+N+LING C   +  EA +L   M     LPD V++NTL++   + +++SEA  LL +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 442 KNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGRI 621
             +G+ P+  T+NI+V+ YCK G + DA+  I  M  +G  PD  TYNTLI+G C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 622 DEGLRLRVEM 651
            E  R   EM
Sbjct: 435 GEAFRTMDEM 444



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 56/204 (27%), Positives = 96/204 (47%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
           P +   +  V  Y + G+   A  V + MT+    P             N+    ++  +
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335

Query: 208 CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              + N    L +     ++N LING    +K SEA +LL  M E    P++VT N ++ 
Sbjct: 336 RDEMEN----LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVK 391

Query: 388 ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
             CK+ ++ +A + +T M+  G  P   TYN L+ GYCK G + +A + ++ M    +  
Sbjct: 392 WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKM 451

Query: 568 DLWTYNTLIDGLCSEGRIDEGLRL 639
           D  T NT++  LC E +++E  +L
Sbjct: 452 DSVTLNTILRTLCREKKLEEAYKL 475



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 55/158 (34%), Positives = 75/158 (47%)
 Frame = +1

Query: 178 KSENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLP 357
           K  NVD  L   ++ ++     +  ST T+N +I G C   K  +A+  L  + E   LP
Sbjct: 500 KDGNVDRAL---KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 358 DSVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVI 537
           D  T+NT+L   C++  + +A      M      P   T NIL+RG C  G L  A K+ 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLF 616

Query: 538 ELMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
                 G   D  TYNTLI  LC EGR+D+   L  EM
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 48/131 (36%), Positives = 68/131 (51%)
 Frame = +1

Query: 241 GVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEA 420
           G S    T+N LINGYC      EA   +  MG  +   DSVT NT+L  LC++ +L EA
Sbjct: 413 GFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472

Query: 421 RDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDG 600
             LL+  + RG      +Y  L+ GY K G +  A K+ + M    + P   TYN +I G
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532

Query: 601 LCSEGRIDEGL 633
           LC  G+ ++ +
Sbjct: 533 LCQCGKTEQAI 543



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 43/142 (30%), Positives = 77/142 (54%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           ++++ + + G  +   ++  LI GY        A++L   M E + +P +VT+N ++  L
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
           C+  +  +A   L ++   GLLP   TYN ++ GYC+ G +  A +    M  N   PD+
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 574 WTYNTLIDGLCSEGRIDEGLRL 639
           +T N L+ GLC EG +++ L+L
Sbjct: 594 FTCNILLRGLCMEGVLEKALKL 615



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 44/136 (32%), Positives = 65/136 (47%)
 Frame = +1

Query: 220 VNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCK 399
           +N+ +  G+    +T+N +++GYC      +A +    M E    PD  T N LL  LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 400 KNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWT 579
           +  L +A  L     ++G      TYN L+   CK G L DA  ++  M    + PD +T
Sbjct: 606 EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 580 YNTLIDGLCSEGRIDE 627
           YN +I  L   GRI E
Sbjct: 666 YNAIITALTDSGRIRE 681



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 43/146 (29%), Positives = 70/146 (47%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           +++ +    GV  +  T NI++  YC   K  +A   +  M E    PD VT+NTL++  
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
           CK   + EA   + +M  + +     T N ++R  C+   L +A K++      G   D 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 574 WTYNTLIDGLCSEGRIDEGLRLRVEM 651
            +Y TLI G   +G +D  L+L  EM
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEM 514



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 23/227 (10%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
            P+    +  +G   QCG    A    + + +    P           +  + +   +   
Sbjct: 521  PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 208  CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              ++V +S +  V     T NIL+ G C+     +A++L  +        D+VT+NTL+ 
Sbjct: 581  HNKMVENSFKPDVF----TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636

Query: 388  ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
            +LCK+ RL +A +LL++M+ + L P   TYN ++      G + +A + +  M   G  P
Sbjct: 637  SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696

Query: 568  D-----------------------LWTYNTLIDGLCSEGRIDEGLRL 639
            D                          Y+  I  LC+EG+  + +R+
Sbjct: 697  DQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 23/215 (10%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
            P +   +T +  Y + G    A Q  ++M +  F+P              +     ++  
Sbjct: 556  PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL-- 613

Query: 208  CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              ++ N  +  G ++ T T+N LI   C   +  +A  LL  M E +  PD  T+N ++ 
Sbjct: 614  --KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671

Query: 388  ALCKKNRLSEARDLLTDMKNRGLLP-----------------------SRNTYNILVRGY 498
            AL    R+ EA + ++ M  +G LP                       S   Y+  ++  
Sbjct: 672  ALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKEL 731

Query: 499  CKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGL 603
            C  G   DA ++       G+  D  TY  L+DGL
Sbjct: 732  CTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766


>ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481027|gb|AES62230.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  228 bits (580), Expect = 1e-57
 Identities = 109/217 (50%), Positives = 152/217 (70%)
 Frame = +1

Query: 1   LHPDKAVPRPTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNK 180
           L  D  +P+P   LLDT++ AYV    P L HQ+F++M +L+FRP            V +
Sbjct: 130 LRSDHTIPKP---LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALV-R 185

Query: 181 SENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPD 360
           S +  S++  + +  D+++LGV  + +TFNILI+GYC  N   EA+ L+  MGEY C PD
Sbjct: 186 SNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPD 245

Query: 361 SVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIE 540
           +VT+NT+L ALCK+++L++ RDLL  MKN GL P+RNTYNILV GYCK+ WL +AA+VIE
Sbjct: 246 NVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIE 305

Query: 541 LMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
           LM+  G+ PD+WTYNT++ GLC EG+IDE +RLR +M
Sbjct: 306 LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKM 342



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEAR-DLLTD 438
           T+N ++ G C   K  EA+ L   M  +  +PD VT+NTL+D  C ++R S+A   L+ +
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEE 376

Query: 439 MKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGR 618
           MK RG+  +  T+NI+++ +C  G + +A+ V+  M  +G  PD +TYNT+I+G C  G+
Sbjct: 377 MKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGK 436

Query: 619 IDEGLRLRVEM 651
           + E  ++  EM
Sbjct: 437 MAEAYKMMDEM 447



 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 47/134 (35%), Positives = 69/134 (51%)
 Frame = +1

Query: 232 IRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRL 411
           +  G S    T+N +INGYC   K +EA +++  MG      D+ T NTLL  +C + +L
Sbjct: 413 VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQL 472

Query: 412 SEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTL 591
            +A  L    + RG +    TY  L+ GY K      A K+ E M   G+   + TYNT+
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532

Query: 592 IDGLCSEGRIDEGL 633
           I GLC  G+ D+ +
Sbjct: 533 IRGLCLSGKTDQAV 546



 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 44/133 (33%), Positives = 72/133 (54%)
 Frame = +1

Query: 241 GVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEA 420
           G  L   T+  LI GY    +   A++L   M E   +   +T+NT++  LC   +  +A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545

Query: 421 RDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDG 600
            D L ++  +GL+P  +T NI++ GYC  G +  A +    M  + + PD++T N L+ G
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605

Query: 601 LCSEGRIDEGLRL 639
           LC EG +++GL L
Sbjct: 606 LCREGMLEKGLTL 618



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 45/143 (31%), Positives = 72/143 (50%)
 Frame = +1

Query: 220 VNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCK 399
           +N+ +  G+    ST NI+I+GYC      +A +    M E+   PD  T N LL  LC+
Sbjct: 549 LNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCR 608

Query: 400 KNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWT 579
           +  L +   L     ++G      TYNI++  +CK   L DA  ++  M    + PD +T
Sbjct: 609 EGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYT 668

Query: 580 YNTLIDGLCSEGRIDEGLRLRVE 648
           YN ++ GL   GR +E  +L ++
Sbjct: 669 YNAIVTGLTKAGRTEEAEKLALK 691



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 46/158 (29%), Positives = 70/158 (44%)
 Frame = +1

Query: 178 KSENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLP 357
           K E  D  L   ++  +    G+  +  T+N +I G CL  K  +A++ L  + E   +P
Sbjct: 503 KDEQADRAL---KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559

Query: 358 DSVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVI 537
           D  T N ++   C +  + +A      M    L P   T NIL+RG C+ G L     + 
Sbjct: 560 DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619

Query: 538 ELMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
                 G P D  TYN +I   C E R+++   L  EM
Sbjct: 620 NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM 657



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/146 (28%), Positives = 71/146 (48%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           +++++  R G+ L T T N L++  CL  +  +A  L     +   + D VT+ TL+   
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGY 501

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
            K  +   A  L  +MK  G++ +  TYN ++RG C  G    A   +  +   G+ PD 
Sbjct: 502 FKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE 561

Query: 574 WTYNTLIDGLCSEGRIDEGLRLRVEM 651
            T N +I G C EG +++  +   +M
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKM 587



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/146 (30%), Positives = 69/146 (47%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           ++V +    GV  +  T NI+I  +C   K  EA  ++  M E    PD  T+NT+++  
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGY 431

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
           CK  +++EA  ++ +M  +GL     T N L+   C    L DA  +       G   D 
Sbjct: 432 CKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE 491

Query: 574 WTYNTLIDGLCSEGRIDEGLRLRVEM 651
            TY TLI G   + + D  L+L  EM
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEM 517



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
 Frame = +1

Query: 217  IVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALC 396
            + N  I  G  + T T+NI+I+ +C   +  +A +L+  M   +  PD  T+N ++  L 
Sbjct: 618  LFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLT 677

Query: 397  KKNRLSEARDLLTDMKNRG-----------LLPSRNTYNILVRGYCKMGWLTDAAKVIEL 543
            K  R  EA  L      +G           L  S   Y+  +   C  G   DA K+ + 
Sbjct: 678  KAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQ 737

Query: 544  MSLNGVPPDLWTYNTLIDGL 603
                GV  + +TY  L+DGL
Sbjct: 738  AEQKGVSLNKYTYIKLMDGL 757


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  227 bits (578), Expect = 2e-57
 Identities = 111/217 (51%), Positives = 151/217 (69%)
 Frame = +1

Query: 1   LHPDKAVPRPTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNK 180
           LH      +  + +LDT++GAYV C  P  A Q+F+RM +L  +P            V +
Sbjct: 128 LHSPFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALV-R 186

Query: 181 SENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPD 360
             +  S+ + K I +D I+LGV ++T+TFNILI G C+ NK SEA+ L+  M ++ C PD
Sbjct: 187 YPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPD 246

Query: 361 SVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIE 540
           +V++NT+LD LCKK +L+EARDLL DMKN GLLP+RNT+NILV GYCK+GWL +AA+VI+
Sbjct: 247 NVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVID 306

Query: 541 LMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
           LM+ N V PD+WTYN LI GLC +G+IDE  RL+ EM
Sbjct: 307 LMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM 343



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVN--KSENVDSM 201
           P     +T +     C   +   ++ D+M     +P           +V   K +N  + 
Sbjct: 350 PDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 409

Query: 202 LVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTL 381
           L   R + +S   G S    TFN LINGYC   + SEA  ++  M       +SVT NT+
Sbjct: 410 L---RKMEES---GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 463

Query: 382 LDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGV 561
           L  LC + +L +A  LL+    RG      +Y  L+ GY K G   +A K+ + M    +
Sbjct: 464 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEI 523

Query: 562 PPDLWTYNTLIDGLCSEGRIDEGL 633
            P + TYNT+I GLC  G+ D+ +
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSI 547



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 54/204 (26%), Positives = 98/204 (48%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
            P     +T +  Y + G    A ++ D M++   +               + +  D+   
Sbjct: 420  PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY-- 477

Query: 208  CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              ++++ + + G  +   ++  LI GY    K  EAM+L   M E + +P  +T+NT++ 
Sbjct: 478  --KLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG 535

Query: 388  ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
             LC   +  ++ D L ++   GL+P   TYN ++ GYC+ G +  A +    M      P
Sbjct: 536  GLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKP 595

Query: 568  DLWTYNTLIDGLCSEGRIDEGLRL 639
            DL+T N L+ GLC+EG +D+ L+L
Sbjct: 596  DLFTCNILLRGLCTEGMLDKALKL 619



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/130 (36%), Positives = 72/130 (55%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
           T+N+LI G C   K  EA  L   M     LPD VT+NTL++     +   +  +L+  M
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 442 KNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGRI 621
           + +G+ P+  TYN++V+ Y K G + +A   +  M  +G  PD  T+NTLI+G C  GR+
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 622 DEGLRLRVEM 651
            E  R+  EM
Sbjct: 439 SEAFRMMDEM 448



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 45/133 (33%), Positives = 66/133 (49%)
 Frame = +1

Query: 253 STSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLL 432
           S  T+N +I G C   K  ++++ L  + E   +PD  T+NT++   C++ ++ +A    
Sbjct: 526 SIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFH 585

Query: 433 TDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSE 612
             M  +   P   T NIL+RG C  G L  A K+       G   D  TYNT+I GLC E
Sbjct: 586 NKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKE 645

Query: 613 GRIDEGLRLRVEM 651
            R +E   L  EM
Sbjct: 646 DRFEEAFDLLAEM 658



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 58/187 (31%), Positives = 86/187 (45%)
 Frame = +1

Query: 91  AHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLVCKRIVNDSIRLGVSLSTSTFN 270
           A ++ D M  LK  P            +N   +  S L    +++     GV  +  T+N
Sbjct: 336 AFRLKDEMENLKLLPDVVTYNT----LINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYN 391

Query: 271 ILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDMKNR 450
           +++  Y    K   A   LR M E    PD VTFNTL++  CK  RLSEA  ++ +M  +
Sbjct: 392 VVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRK 451

Query: 451 GLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGRIDEG 630
           GL  +  T N ++   C    L DA K++   S  G   D  +Y TLI G   +G+  E 
Sbjct: 452 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEA 511

Query: 631 LRLRVEM 651
           ++L  EM
Sbjct: 512 MKLWDEM 518



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 48/193 (24%), Positives = 83/193 (43%)
 Frame = +1

Query: 49   TAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLVCKRIVND 228
            T +  Y + G  V A +++D M + +  P             +  +   S+      +N+
Sbjct: 497  TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI----DKLNE 552

Query: 229  SIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNR 408
             +  G+    +T+N +I GYC   +  +A +    M +    PD  T N LL  LC +  
Sbjct: 553  LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 409  LSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNT 588
            L +A  L     ++G      TYN ++ G CK     +A  ++  M    + PD +TYN 
Sbjct: 613  LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 589  LIDGLCSEGRIDE 627
            ++  L   GR+ E
Sbjct: 673  ILSALADAGRMKE 685



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
            P +   +T +  Y + G    A Q  ++M K  F+P              +   +D  L 
Sbjct: 560  PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM-LDKAL- 617

Query: 208  CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
              ++ N  I  G ++   T+N +I+G C  ++F EA +LL  M E    PD  T+N +L 
Sbjct: 618  --KLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675

Query: 388  ALCKKNRLSEARDLLTDMKNRGLL-----------------------PSRNTYNILVRGY 498
            AL    R+ EA + ++ +  +G L                       P+  T++  +   
Sbjct: 676  ALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINEL 735

Query: 499  CKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGL 603
            C  G   DA  +++  +  G+     TY +L++GL
Sbjct: 736  CTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
 Frame = +1

Query: 262  TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
            T NIL+ G C      +A++L  +        D+VT+NT++  LCK++R  EA DLL +M
Sbjct: 599  TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM 658

Query: 442  KNRGLLPSRNTYNILVRGYCKMGWLTDA----AKVIE-------LMSLN----------- 555
            + + L P   TYN ++      G + +A    ++++E        +SLN           
Sbjct: 659  EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETS 718

Query: 556  -GVPPDLWTYNTLIDGLCSEGRIDEGLRL 639
                P+  T++  I+ LC++G+  + + +
Sbjct: 719  QESDPNSVTFSEQINELCTQGKYKDAMHM 747


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
           gi|449529106|ref|XP_004171542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  223 bits (569), Expect = 2e-56
 Identities = 104/217 (47%), Positives = 156/217 (71%)
 Frame = +1

Query: 1   LHPDKAVPRPTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNK 180
           LHP + +P P+K LLDT++GAYVQ   P LA Q+F++M +L +RP            V  
Sbjct: 129 LHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRY 188

Query: 181 SENVDSMLVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPD 360
             +  S+L+ ++++ DSI+LGV  +T++FNILI GYCL +K  +A++ +  M E+ C+PD
Sbjct: 189 PSS-SSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPD 247

Query: 361 SVTFNTLLDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIE 540
           +V++NT+LDAL K+  L EARDLL DMK++GL P+++TYN+LV GYC++G L +A KVIE
Sbjct: 248 TVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIE 307

Query: 541 LMSLNGVPPDLWTYNTLIDGLCSEGRIDEGLRLRVEM 651
           +M+ N + P +WTYN L++G C++G+IDE  R+R EM
Sbjct: 308 IMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344



 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/130 (37%), Positives = 76/130 (58%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
           T+N+L+NG+C   K  EA  +   M + + LPD VT+NTL+D   +    SE   L+ +M
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 442 KNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDGLCSEGRI 621
             +G+  +  TYNI+++  CK G +T+A   ++ M  NG+ PD  TYNTLI   C  G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 622 DEGLRLRVEM 651
            +  R+  EM
Sbjct: 440 GKAFRMMDEM 449



 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
 Frame = +1

Query: 28   PTKALLDTAVGAYVQCGYPVLAHQVFDRMTK--LKFRPXXXXXXXXXXXFVNKSENVDSM 201
            P     +T +GAY + G    A ++ D MT   LK                 K +   ++
Sbjct: 421  PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNL 480

Query: 202  LVCKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTL 381
            L        + + G  L   ++ ILI GY    K   A+ L   M E   +P ++T+N++
Sbjct: 481  LC------SASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534

Query: 382  LDALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGV 561
            +  LC+  ++ +A D L +M   GL+P   TYNI++ G+C  G +  A +    M  N  
Sbjct: 535  IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF 594

Query: 562  PPDLWTYNTLIDGLCSEGRIDEGLRL 639
             PD++T N L+ GLC EG +++ L+L
Sbjct: 595  KPDVYTCNILLRGLCREGMLEKALKL 620



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 60/204 (29%), Positives = 96/204 (47%)
 Frame = +1

Query: 28  PTKALLDTAVGAYVQCGYPVLAHQVFDRMTKLKFRPXXXXXXXXXXXFVNKSENVDSMLV 207
           P K   +  V  Y + G    A +V + MT+    P           F N  +  ++   
Sbjct: 281 PNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF-- 338

Query: 208 CKRIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLD 387
             RI ++  ++ V     T+N LI+G       SE   L+  M +     ++VT+N +L 
Sbjct: 339 --RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILK 396

Query: 388 ALCKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPP 567
            +CKK  ++EA   L  M+  GL P   TYN L+  YCK G +  A ++++ M+  G+  
Sbjct: 397 WMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKI 456

Query: 568 DLWTYNTLIDGLCSEGRIDEGLRL 639
           D WT NT++  LC E ++DE   L
Sbjct: 457 DTWTLNTILHCLCVEKKLDEAYNL 480



 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 44/146 (30%), Positives = 75/146 (51%)
 Frame = +1

Query: 214 RIVNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDAL 393
           R++++    G+ + T T N +++  C+  K  EA  LL S  +   + D V++  L+   
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503

Query: 394 CKKNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDL 573
            K  +   A +L  +MK R ++PS  TYN ++ G C+   +  A   +  M  NG+ PD 
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563

Query: 574 WTYNTLIDGLCSEGRIDEGLRLRVEM 651
            TYN +I G C EG +++  +   EM
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEM 589



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 44/137 (32%), Positives = 66/137 (48%)
 Frame = +1

Query: 241 GVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEA 420
           G+S    T+N LI  YC   K  +A  ++  M       D+ T NT+L  LC + +L EA
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEA 477

Query: 421 RDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWTYNTLIDG 600
            +LL     RG +    +Y IL+ GY K      A  + + M    + P   TYN++I G
Sbjct: 478 YNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGG 537

Query: 601 LCSEGRIDEGLRLRVEM 651
           LC   ++D+ +    EM
Sbjct: 538 LCQSRKVDQAIDKLNEM 554



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 43/144 (29%), Positives = 70/144 (48%)
 Frame = +1

Query: 220 VNDSIRLGVSLSTSTFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCK 399
           +N+ +  G+    +T+NI+I+G+CL     +A +    M E    PD  T N LL  LC+
Sbjct: 551 LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610

Query: 400 KNRLSEARDLLTDMKNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPDLWT 579
           +  L +A  L   + ++G      TYN ++   CK G   +A  ++  M    + PD +T
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670

Query: 580 YNTLIDGLCSEGRIDEGLRLRVEM 651
           Y  +I  L   GRI E     ++M
Sbjct: 671 YKVIIAALTDAGRIKEAEEFTLKM 694



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/103 (30%), Positives = 55/103 (53%)
 Frame = +1

Query: 262 TFNILINGYCLRNKFSEAMELLRSMGEYDCLPDSVTFNTLLDALCKKNRLSEARDLLTDM 441
           T NIL+ G C      +A++L  ++       D VT+NT++ +LCK+ +   A DLLT+M
Sbjct: 600 TCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEM 659

Query: 442 KNRGLLPSRNTYNILVRGYCKMGWLTDAAKVIELMSLNGVPPD 570
           + + L P + TY +++      G + +A +    M  +G+  D
Sbjct: 660 EAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702