BLASTX nr result

ID: Angelica23_contig00029091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029091
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...    55   5e-06
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]    55   5e-06

>ref|XP_002297659.1| predicted protein [Populus trichocarpa] gi|222844917|gb|EEE82464.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/116 (35%), Positives = 66/116 (56%)
 Frame = -3

Query: 349 GLQQDERYADIYSNEVYSPSGSTSKASNGSGGIATTRNMSGKNLQEYKRRGNSSNQNLLG 170
           G+++D R+ DIYS++ Y  S    ++S G+G     +   GK+ +  +RRG++SN+ LL 
Sbjct: 134 GVEEDGRFKDIYSDKAYY-SERKERSSKGNGSSERYKERKGKDKKVTERRGSNSNEKLLK 192

Query: 169 HVSSRLNNRKSMKQTEASNYRPDGGSQNSKSFNESKHHRQPEIEEAPVEPALDEIA 2
           +     NNRKSM Q EA+      GS+N+  F + +  +  +   A  E ALDE+A
Sbjct: 193 YTGLSNNNRKSMDQVEAAYESSVRGSKNANGFEDDQRTKNEKSAPAVPEIALDEVA 248


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
           predicted protein [Populus trichocarpa]
          Length = 1159

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/116 (31%), Positives = 61/116 (52%)
 Frame = -3

Query: 349 GLQQDERYADIYSNEVYSPSGSTSKASNGSGGIATTRNMSGKNLQEYKRRGNSSNQNLLG 170
           G++++E + DI+S+  Y  S  T ++S G+G     R   GK+ +  +R  + SN+NL  
Sbjct: 134 GVEENETFKDIHSDIAYY-SERTERSSKGNGSKERQREGKGKDKKVPERHHSISNENLEK 192

Query: 169 HVSSRLNNRKSMKQTEASNYRPDGGSQNSKSFNESKHHRQPEIEEAPVEPALDEIA 2
           H     +NR+S+ Q+EA       GS+    F + +  +  +   A  E ALDE+A
Sbjct: 193 HSEFSNDNRRSVDQSEAVYESSVRGSKIGNGFEDDQRPKNQKRAPAVPEIALDEVA 248


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1148

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
 Frame = -3

Query: 349 GLQQDERYADIYSNEVYSPSGSTSKASNGSGGIATTRNMSGKNLQEYKRRGNSSNQNLLG 170
           G++++ RY DIYS++ YSP   + K+S+        R +  +  +E   + NSS+ + + 
Sbjct: 125 GVEENGRYKDIYSDKEYSPRKRSHKSSH--------RIVEKERNKERSEKRNSSSTSSIK 176

Query: 169 HVSSRL----NNRKSMKQTEASNYRPDGGSQNSKSFNESKHHRQPEIEEAPVEPALDEIA 2
           H+ ++     N+  SMK+      R     +N+K F+E++        +A  EPALDE+A
Sbjct: 177 HLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEPALDEVA 236


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
 Frame = -3

Query: 349 GLQQDERYADIYSNEVYSPSGSTSKASNGSGGIATTRNMSGKNLQEYKRRGNSSNQNLLG 170
           G++++ RY DIYS++ YSP   + K+S+        R +  +  +E   + NSS+ + + 
Sbjct: 125 GVEENGRYKDIYSDKEYSPRKRSHKSSH--------RIVEKERNKERSEKRNSSSTSSIK 176

Query: 169 HVSSRL----NNRKSMKQTEASNYRPDGGSQNSKSFNESKHHRQPEIEEAPVEPALDEIA 2
           H+ ++     N+  SMK+      R     +N+K F+E++        +A  EPALDE+A
Sbjct: 177 HLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEPALDEVA 236


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