BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00029085
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   115   4e-24
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ...   112   4e-23

>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = -1

Query: 313 NTLQTYKNSSSSSLQPTQNPSQTKTIRYRLS*LCREGQPHVAHQLFDKISRPTTVLWNTI 134
           N + T  N      Q   N + + +IR RLS LCREGQPH+A  L D + RP+TV+WN++
Sbjct: 27  NQIHTLPNQKQKQKQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSV 86

Query: 133 IIGFICNNMSDQAIMLYARMLSSSS-SLPDPYTYSSTLKACAETR 2
           IIGFICNN+  QA++LYA+M S+SS S  DPYT+SSTLKACA T+
Sbjct: 87  IIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTK 131


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/89 (64%), Positives = 65/89 (73%)
 Frame = -1

Query: 268 PTQNPSQTKTIRYRLS*LCREGQPHVAHQLFDKISRPTTVLWNTIIIGFICNNMSDQAIM 89
           P + P +  TIR RLS LCR+G PH A  LFD I RPTTVLWNTIIIGFICNNM   A++
Sbjct: 30  PPKTPPKPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALL 89

Query: 88  LYARMLSSSSSLPDPYTYSSTLKACAETR 2
            YARM +S S   D YT+SSTLKACA+ R
Sbjct: 90  FYARMRASPSPKFDSYTFSSTLKACAQAR 118


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/89 (64%), Positives = 65/89 (73%)
 Frame = -1

Query: 268 PTQNPSQTKTIRYRLS*LCREGQPHVAHQLFDKISRPTTVLWNTIIIGFICNNMSDQAIM 89
           P + P +  TIR RLS LCR+G PH A  LFD I RPTTVLWNTIIIGFICNNM   A++
Sbjct: 30  PPKTPPKPPTIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALL 89

Query: 88  LYARMLSSSSSLPDPYTYSSTLKACAETR 2
            YARM +S S   D YT+SSTLKACA+ R
Sbjct: 90  FYARMRASPSPKFDSYTFSSTLKACAQAR 118


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 12/108 (11%)
 Frame = -1

Query: 289 SSSSSLQPTQNPS-----------QTKTIRYRLS*LCREGQPHVAHQLFDKISRPTTVLW 143
           SS++ L  +Q+PS           +  TIRYRLS LC+EGQ H+A QLFD + RP+TVLW
Sbjct: 3   SSATPLPLSQSPSHLPLHTHSTNPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLW 62

Query: 142 NTIIIGFICNNMSDQAIMLYARMLSSSSSLP-DPYTYSSTLKACAETR 2
           NTIIIG +CNN  D+A++ Y+ M SSS  +  D YTYSS LKACA+TR
Sbjct: 63  NTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTR 110


>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329184|gb|EFH59603.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 824

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 QTYKNSSSSSLQPTQNPSQTKTIRYRLS*LCREGQPHVAHQLFDKISRPTTVLWNTIIIG 125
           Q     SS+   PT  P QT +IR RLS +C+EG P +A QLFD I +PTTVLWNTIIIG
Sbjct: 21  QNQTRHSSTFSPPTLTP-QTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIG 79

Query: 124 FICNNMSDQAIMLYARMLSSSS-SLPDPYTYSSTLKACAETR 2
           FICNN+  +A++ Y+RM  ++  +  D YTYSSTLKACAET+
Sbjct: 80  FICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETK 121