BLASTX nr result

ID: Angelica23_contig00028997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028997
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    79   4e-13
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    75   4e-12
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    75   7e-12
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    70   2e-10
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    68   9e-10

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/86 (39%), Positives = 48/86 (55%)
 Frame = -2

Query: 286 WNLNIPPKVKKILWRASRGCLPTRFQLRLKHVNVPRYCPFCQTSDETIYHVLIECSFTKK 107
           W +  PPK+    WRA+R CLPTRF L ++HV+ P  CP C++  ET  H L+EC   + 
Sbjct: 512 WKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARD 571

Query: 106 CFERVGIWQNLVPGLSFSGWLEALFA 29
            ++  G+        SF  WL  +FA
Sbjct: 572 VWDESGLAMLQGNFGSFVDWLATMFA 597


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = -2

Query: 286  WNLNIPPKVKKILWRASRGCLPTRFQLRLKHVNVPRYCPFCQTSDETIYHVLIECSFTKK 107
            WNL +PPKVK  LWR+ R  LPTR +L+ + VN  + C  C+  DE   H+   C+ +++
Sbjct: 1421 WNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQ 1480

Query: 106  CFERVGIWQNL 74
            C++++G+W  +
Sbjct: 1481 CWQQLGLWSKV 1491


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = -2

Query: 286  WNLNIPPKVKKILWRASRGCLPTRFQLRLKHVNVPRYCPFCQTSDETIYHVLIECSFTKK 107
            W +  PPK+    WRA+R CLPTRF L ++HV+ P  CP C++  ET  H L+EC  T+ 
Sbjct: 1242 WKVTTPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSEPETTLHALVECVATRD 1301

Query: 106  CFE 98
             ++
Sbjct: 1302 VWD 1304


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/76 (36%), Positives = 39/76 (51%)
 Frame = -2

Query: 286 WNLNIPPKVKKILWRASRGCLPTRFQLRLKHVNVPRYCPFCQTSDETIYHVLIECSFTKK 107
           W L +PP+VKK++WR  R C PTR +L  + VN P  C  C+   E  YH+   C     
Sbjct: 60  WRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAID 119

Query: 106 CFERVGIWQNLVPGLS 59
            +    +W  + P LS
Sbjct: 120 VWNTANVWHLIAPSLS 135


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/72 (41%), Positives = 40/72 (55%)
 Frame = -2

Query: 286 WNLNIPPKVKKILWRASRGCLPTRFQLRLKHVNVPRYCPFCQTSDETIYHVLIECSFTKK 107
           W L +PPKVK  LWRA R CLPTR +L+ K V     C  C    E   H+   CS +  
Sbjct: 370 WRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSML 429

Query: 106 CFERVGIWQNLV 71
            ++R+G+W  L+
Sbjct: 430 YWQRIGLWSPLM 441


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