BLASTX nr result

ID: Angelica23_contig00028882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028882
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...    77   2e-12
ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    71   8e-11
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    71   8e-11
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 781

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +3

Query: 111 MSATKSAGIRYAPEDPSLPKPWRGLVDGKTGNIYFWNPE 227
           M+AT +AG RYAPEDP+LPKPWRGLVDGKTG +YFWNPE
Sbjct: 1   MAATATAGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 39


>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +3

Query: 114 SATKSAGIRYAPEDPSLPKPWRGLVDGKTGNIYFWNPE 227
           + T SAG RYAP+DP+LPKPWRGLVDGKTG +YFWNPE
Sbjct: 5   ATTSSAGPRYAPDDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
           sativus]
          Length = 778

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 3/42 (7%)
 Frame = +3

Query: 111 MSATKSA---GIRYAPEDPSLPKPWRGLVDGKTGNIYFWNPE 227
           M+AT +A   G RYAPEDP+LPKPWRGLVDGKTG +YFWNPE
Sbjct: 1   MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Cucumis sativus]
          Length = 785

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 3/42 (7%)
 Frame = +3

Query: 111 MSATKSA---GIRYAPEDPSLPKPWRGLVDGKTGNIYFWNPE 227
           M+AT +A   G RYAPEDP+LPKPWRGLVDGKTG +YFWNPE
Sbjct: 1   MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +3

Query: 114 SATKSAGIRYAPEDPSLPKPWRGLVDGKTGNIYFWNPE 227
           +   S G RYAPEDP+LPKPWRGLVDGKTG +YFWNPE
Sbjct: 5   ATASSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPE 42


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