BLASTX nr result

ID: Angelica23_contig00028806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028806
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   134   1e-29
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              134   1e-29
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   125   5e-27
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   125   5e-27
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su...   122   4e-26

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = +3

Query: 3    CNGRLVRKYTEAELYKQLAYFCHVLDTVRCMEKIDGKIRMPVEKELARIRPLVESAALQV 182
            CNGRLVRKYTEA+LYKQL+YFCHVLDTVRC+EK++   R+P+EKELARIRPLV  AA   
Sbjct: 1442 CNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTT 1501

Query: 183  QKLRDRCAYGWVQLSDLCVSI 245
            QK+RDRCAYGWVQL DL V++
Sbjct: 1502 QKIRDRCAYGWVQLDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = +3

Query: 3    CNGRLVRKYTEAELYKQLAYFCHVLDTVRCMEKIDGKIRMPVEKELARIRPLVESAALQV 182
            CNGRLVRKYTEA+LYKQL+YFCHVLDTVRC+EK++   R+P+EKELARIRPLV  AA   
Sbjct: 1481 CNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTT 1540

Query: 183  QKLRDRCAYGWVQLSDLCVSI 245
            QK+RDRCAYGWVQL DL V++
Sbjct: 1541 QKIRDRCAYGWVQLDDLTVTV 1561


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +3

Query: 3    CNGRLVRKYTEAELYKQLAYFCHVLDTVRCMEKIDGKIRMPVEKELARIRPLVESAALQV 182
            CNG L+R+YTEA+LYKQLAYFC VLDTVRC+EK++  +R+ VEKEL RIRP+VE+AA  V
Sbjct: 1481 CNGHLLRQYTEADLYKQLAYFCFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAASTV 1540

Query: 183  QKLRDRCAYGWVQLSDLCVS 242
            +K RDRCAY WVQL DL VS
Sbjct: 1541 EKFRDRCAYSWVQLKDLIVS 1560


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/81 (67%), Positives = 71/81 (87%)
 Frame = +3

Query: 3    CNGRLVRKYTEAELYKQLAYFCHVLDTVRCMEKIDGKIRMPVEKELARIRPLVESAALQV 182
            CNGRLVRKYTEAELYKQL+++C++LDTVRCMEK+D   R+ +EK++ +IRP+V+ A   V
Sbjct: 1446 CNGRLVRKYTEAELYKQLSFYCYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDLAVSTV 1505

Query: 183  QKLRDRCAYGWVQLSDLCVSI 245
            QK+RDRCAYGWVQLSDL V++
Sbjct: 1506 QKIRDRCAYGWVQLSDLSVTV 1526


>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
          Length = 1512

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/81 (64%), Positives = 70/81 (86%)
 Frame = +3

Query: 3    CNGRLVRKYTEAELYKQLAYFCHVLDTVRCMEKIDGKIRMPVEKELARIRPLVESAALQV 182
            CNGRLVRKYTEA+LYKQL+YFCHV DTV C+EK++ K R+P+EKEL +IR +++SAA   
Sbjct: 1432 CNGRLVRKYTEADLYKQLSYFCHVFDTVSCIEKMEAKSRIPIEKELIKIRAVIKSAASTA 1491

Query: 183  QKLRDRCAYGWVQLSDLCVSI 245
            Q++RDRCA+GWV+L +L +S+
Sbjct: 1492 QEIRDRCAFGWVKLENLVISV 1512


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