BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028799
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar...   148   4e-34
ref|XP_002891041.1| pentatricopeptide repeat-containing protein ...   142   2e-32

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/116 (67%), Positives = 94/116 (81%), Gaps = 7/116 (6%)
 Frame = -3

Query: 338 ISLFRRMV-------NSSNRPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYV 180
           +SLFRRM+          NRPN+V+ VC+LSACGH+GML+LGK IHGY+YRN LG D +V
Sbjct: 273 LSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFV 332

Query: 179 SNGLVDMYGKCGSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
           SN LVDMYGKCG L EA+RVFD+T +R+LTSWNSMINC ALHGQS  A+S+FEEM+
Sbjct: 333 SNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMM 388


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/109 (68%), Positives = 90/109 (82%)
 Frame = -3

Query: 338 ISLFRRMVNSSNRPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYVSNGLVDM 159
           I LFRRMV   NRPN V+VVC LSACGH GMLQLG+ IHGY+Y+N L  D +V N LVDM
Sbjct: 222 IELFRRMVFECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDM 281

Query: 158 YGKCGSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
           YGKCGSL +A++VF+  P++ LTSWNSMINCFALHGQSD A++IFE+M+
Sbjct: 282 YGKCGSLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMV 330



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -3

Query: 338 ISLFRRMVNSSN-RPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYVSNGLVD 162
           +SLFR M+ S   RPN       L  C  S   +    +H  I ++       V   LVD
Sbjct: 91  LSLFRHMLRSQPPRPNHFIFPHALKTCPESCAAE---SLHAQIVKSGFHEYPVVQTALVD 147

Query: 161 MYGKC-GSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
            Y K  G L  AK+VFD+   R++ S+ +M++ FA  G  + AV +F EML
Sbjct: 148 SYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVGDVESAVRVFGEML 198


>ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|222873268|gb|EEF10399.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/116 (62%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
 Frame = -3

Query: 338 ISLFRRMVNSS-------NRPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYV 180
           I++F++MV  S        RPN+ +VVC LSACGH+GML +GK IHGY+YRN   SD +V
Sbjct: 143 ITIFKKMVGLSLEVQHRDMRPNQTTVVCALSACGHTGMLHVGKWIHGYVYRNMRSSDSFV 202

Query: 179 SNGLVDMYGKCGSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
            N LVDMYGKCG L EAK+VFD T K++LTSWNSMINC ALHGQS+ A+ +FEEML
Sbjct: 203 LNALVDMYGKCGCLKEAKKVFDATSKKSLTSWNSMINCLALHGQSERAICVFEEML 258


>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
           protein; 15445-13829 [Arabidopsis thaliana]
           gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
           putative [Arabidopsis thaliana]
           gi|332193465|gb|AEE31586.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 538

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/110 (63%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
 Frame = -3

Query: 338 ISLFRRMVNS-SNRPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYVSNGLVD 162
           +SLFRRM+N  S RPNEV+VVC LSAC  +G LQL K IH + YR DL SD +VSN LVD
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303

Query: 161 MYGKCGSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
           +YGKCG+L EA  VF    K++LT+WNSMINCFALHG+S+ A+++FEEM+
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353


>ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336883|gb|EFH67300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 586

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/110 (60%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
 Frame = -3

Query: 338 ISLFRRMVNSSN-RPNEVSVVCTLSACGHSGMLQLGKCIHGYIYRNDLGSDCYVSNGLVD 162
           +SLFRRM+N    RPNEV++VC LSAC  +G LQL K IH + YR +L SD +VSN LVD
Sbjct: 244 VSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVD 303

Query: 161 MYGKCGSLVEAKRVFDKTPKRNLTSWNSMINCFALHGQSDCAVSIFEEML 12
           +YGKCG+L EA  VF  + K++LT+WNSMINCFALHG+S+ A+++FE+M+
Sbjct: 304 LYGKCGNLEEASSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMM 353