BLASTX nr result

ID: Angelica23_contig00028769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028769
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   116   2e-24
emb|CBI16626.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]   116   2e-24
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   109   3e-22
ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arab...   105   3e-21

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
           vinifera]
          Length = 876

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/74 (75%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
 Frame = +3

Query: 12  PGPFLVLCPLSVTDGWVSETARFAPKLRLLSYVGDKNHRRSLRRNIYDHVK---AEGDVN 182
           PGPFLVLCPLSVTDGWVSE A FAPKLR+L YVGDK HRRSLRR IY+ VK   ++ DV+
Sbjct: 86  PGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVS 145

Query: 183 SFPFDVLLTTYDIA 224
           + PFD+LLTTYDIA
Sbjct: 146 ALPFDLLLTTYDIA 159


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/74 (75%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
 Frame = +3

Query: 12  PGPFLVLCPLSVTDGWVSETARFAPKLRLLSYVGDKNHRRSLRRNIYDHVK---AEGDVN 182
           PGPFLVLCPLSVTDGWVSE A FAPKLR+L YVGDK HRRSLRR IY+ VK   ++ DV+
Sbjct: 85  PGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVS 144

Query: 183 SFPFDVLLTTYDIA 224
           + PFD+LLTTYDIA
Sbjct: 145 ALPFDLLLTTYDIA 158


>emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
          Length = 1054

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/74 (75%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
 Frame = +3

Query: 12  PGPFLVLCPLSVTDGWVSETARFAPKLRLLSYVGDKNHRRSLRRNIYDHVK---AEGDVN 182
           PGPFLVLCPLSVTDGWVSE A FAPKLR+L YVGDK HRRSLRR IY+ VK   ++ DV+
Sbjct: 94  PGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVS 153

Query: 183 SFPFDVLLTTYDIA 224
           + PFD+LLTTYDIA
Sbjct: 154 ALPFDLLLTTYDIA 167


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
           helicase, putative [Ricinus communis]
          Length = 860

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +3

Query: 15  GPFLVLCPLSVTDGWVSETARFAPKLRLLSYVGDKNHRRSLRRNIYDHVK---AEGDVNS 185
           GPFLVLCPLSVTDGW+SE A+F PKL+ L YVGDK+HRR+LRRN+Y HVK   +  D + 
Sbjct: 87  GPFLVLCPLSVTDGWISEMAKFTPKLKALRYVGDKDHRRNLRRNMYQHVKNHPSSTDGSL 146

Query: 186 FPFDVLLTTYDIA 224
            PFDVLLTTYDIA
Sbjct: 147 LPFDVLLTTYDIA 159


>ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
           lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein
           ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata]
          Length = 873

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/74 (66%), Positives = 57/74 (77%)
 Frame = +3

Query: 3   RNIPGPFLVLCPLSVTDGWVSETARFAPKLRLLSYVGDKNHRRSLRRNIYDHVKAEGDVN 182
           + +PGPFLVLCPLSVTDGWVSE  RF P L +L YVGDK  RR +R+++YDHVK     +
Sbjct: 94  QGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRRDMRKSMYDHVKKSSKGH 153

Query: 183 SFPFDVLLTTYDIA 224
             PFDVLLTTYDIA
Sbjct: 154 LLPFDVLLTTYDIA 167


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