BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028749
         (1493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              476   e-132
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   476   e-132
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   412   e-113
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   408   e-111
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   406   e-111

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  476 bits (1224), Expect = e-132
 Identities = 235/430 (54%), Positives = 306/430 (71%), Gaps = 3/430 (0%)
 Frame = -3

Query: 1386 GTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADPTG 1207
            G  DD+  T  MILSG+P+D+P + H LS +   ERKGLR GKLP++D F+LMGTADPTG
Sbjct: 502  GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 560

Query: 1206 LLNRDEVCVILDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTK 1027
             L  DEVC+ILD+GQ+ G+VLVY++PGLHFGDIHVLNA Y+  +E+ VGNAKY IFF  K
Sbjct: 561  TLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIK 620

Query: 1026 GPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDELE 847
            GPRS+A E+AN DFDGDMYWVS+N QLLQYF+AS PW R   + +V  ++P D+ PDELE
Sbjct: 621  GPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELE 680

Query: 846  HELFKLFLNTKNQNIS-MGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDA 676
            HELF+LFL T+ Q  S +G+AAD+W  + DR LT  DD  +EK+ LK KMLEL DIYYDA
Sbjct: 681  HELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDA 740

Query: 675  LDAPKTGKKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKIGITLRYEIRRL 496
            LDAPK+G KV V  +LK + +PH+M + + Y S S+LG+I DAVE ++       EI RL
Sbjct: 741  LDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRL 800

Query: 495  AFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFK 316
              F    +P A L+ WK+ YD YR EM  AL    +++   A EVINKYK+I+YG  +F+
Sbjct: 801  PLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFE 860

Query: 315  ETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYC 136
            E+ R++ D+  +ALA+YHV Y++  +   V  CNF W+VAG ALC  +  K  EK M+ C
Sbjct: 861  ESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMV-C 919

Query: 135  LPSVLAKILN 106
            +PSVL ++ N
Sbjct: 920  VPSVLRQVFN 929


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  476 bits (1224), Expect = e-132
 Identities = 235/430 (54%), Positives = 306/430 (71%), Gaps = 3/430 (0%)
 Frame = -3

Query: 1386 GTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADPTG 1207
            G  DD+  T  MILSG+P+D+P + H LS +   ERKGLR GKLP++D F+LMGTADPTG
Sbjct: 516  GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 574

Query: 1206 LLNRDEVCVILDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFSTK 1027
             L  DEVC+ILD+GQ+ G+VLVY++PGLHFGDIHVLNA Y+  +E+ VGNAKY IFF  K
Sbjct: 575  TLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIK 634

Query: 1026 GPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDELE 847
            GPRS+A E+AN DFDGDMYWVS+N QLLQYF+AS PW R   + +V  ++P D+ PDELE
Sbjct: 635  GPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELE 694

Query: 846  HELFKLFLNTKNQNIS-MGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYYDA 676
            HELF+LFL T+ Q  S +G+AAD+W  + DR LT  DD  +EK+ LK KMLEL DIYYDA
Sbjct: 695  HELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDA 754

Query: 675  LDAPKTGKKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKIGITLRYEIRRL 496
            LDAPK+G KV V  +LK + +PH+M + + Y S S+LG+I DAVE ++       EI RL
Sbjct: 755  LDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRL 814

Query: 495  AFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGCDDFK 316
              F    +P A L+ WK+ YD YR EM  AL    +++   A EVINKYK+I+YG  +F+
Sbjct: 815  PLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFE 874

Query: 315  ETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKCMLYC 136
            E+ R++ D+  +ALA+YHV Y++  +   V  CNF W+VAG ALC  +  K  EK M+ C
Sbjct: 875  ESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMV-C 933

Query: 135  LPSVLAKILN 106
            +PSVL ++ N
Sbjct: 934  VPSVLRQVFN 943


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  412 bits (1060), Expect = e-113
 Identities = 215/432 (49%), Positives = 287/432 (66%), Gaps = 5/432 (1%)
 Frame = -3

Query: 1392 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 1213
            N+G  DD    A MIL G+PLD+P +++ LS L   E+  L+ GKLP+++S++LMGT DP
Sbjct: 549  NYGEMDDQ-NAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDP 607

Query: 1212 TGLLNRDEVCVILDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFS 1033
            TG L  DEVCVIL++GQISG+VLVYR PGLHFGDIH+L A Y++ +E+ VGN+K+ +FF 
Sbjct: 608  TGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFP 667

Query: 1032 TKGPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNH-RKPCDYPPD 856
             KGPRS+  EIA GDFDGDMY++S+N +LL+ FK S PW    P S  N  R P    P+
Sbjct: 668  QKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPE 727

Query: 855  ELEHELFKLFLNTK-NQNISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIY 685
            ELE ELF++FL    + +  +G+AADSW    DR+L   DD   EK ++K KMLELIDIY
Sbjct: 728  ELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIY 787

Query: 684  YDALDAPKTGKKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKI-GITLRYE 508
            YDALDAPK G KV +PN+LKPD +PHYME+   +QS S+LG I D V+       +   E
Sbjct: 788  YDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDFVKSQTTEEPSPSSE 847

Query: 507  IRRLAFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGC 328
            I +L  FE  P+ +  ++  +  YDNYR EMT A+ +      N   EVI +YK+  YG 
Sbjct: 848  ISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTDKDESAN---EVIQRYKQEFYGA 904

Query: 327  DDFKETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKC 148
              F+++ +S+ +++  ALALY + YDYA   G V KC FVWKVAG  LC F+  K  ++ 
Sbjct: 905  AGFEDSKKSLEELYPQALALYKIVYDYAIHAG-VSKCRFVWKVAGPVLCRFYLNKKMQEK 963

Query: 147  MLYCLPSVLAKI 112
             L C PSVL ++
Sbjct: 964  CLVCAPSVLKEL 975


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  408 bits (1049), Expect = e-111
 Identities = 211/432 (48%), Positives = 286/432 (66%), Gaps = 5/432 (1%)
 Frame = -3

Query: 1392 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 1213
            N+G  DD    A MIL G+PLD+P +++ LS L   E+  L+ G+LP+++S++LMGT DP
Sbjct: 553  NYGEMDDQ-NAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDP 611

Query: 1212 TGLLNRDEVCVILDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFS 1033
            TG L  DEVCVIL++GQISG+VLVYR PGLHFGDIH+L A Y++ +E+ VGN+KY +FF 
Sbjct: 612  TGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFP 671

Query: 1032 TKGPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNH-RKPCDYPPD 856
             KGPRS+  EIA GDFDGDMY++S+N +LL++FK S PW    P S  N  R P    P+
Sbjct: 672  QKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPE 731

Query: 855  ELEHELFKLFLNTK-NQNISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIY 685
            ELE ELF++FL    + +  +G+AADSW    DR L   D+   EK ++K KML+LIDIY
Sbjct: 732  ELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIY 791

Query: 684  YDALDAPKTGKKVRVPNQLKPDCYPHYMEKGNDYQSCSVLGKICDAVEKYKI-GITLRYE 508
            YDALDAPK G KV +PN+L+PD +PHYME+   ++S S+LG I D V+       T   E
Sbjct: 792  YDALDAPKKGDKVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSSE 851

Query: 507  IRRLAFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGC 328
            I +L  FE  P+ +  ++  +  YDNYR EMT A+ +      N   EVI +YK+  YG 
Sbjct: 852  ISKLPCFEDEPVSEFHMEKCRRWYDNYRSEMTQAMKTDKDESAN---EVIQRYKQEFYGA 908

Query: 327  DDFKETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKC 148
              F+++ +S+ +++  AL LY + YDYA   G V KC FVWKVAG  LC F+  K  ++ 
Sbjct: 909  AGFEDSKKSLEELYPQALTLYKIVYDYAIHAG-VSKCGFVWKVAGPVLCRFYLMKKMQEK 967

Query: 147  MLYCLPSVLAKI 112
             L C PSVL ++
Sbjct: 968  SLVCAPSVLKEL 979


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  406 bits (1044), Expect = e-111
 Identities = 216/432 (50%), Positives = 296/432 (68%), Gaps = 5/432 (1%)
 Frame = -3

Query: 1392 NHGTSDDNFTTANMILSGVPLDDPCVQHRLSHLAILERKGLRDGKLPISDSFFLMGTADP 1213
            N+G  DD F  A MIL+G+PLD+  +Q+RLS L   E+K L+ G+L + + ++LMGT DP
Sbjct: 628  NNGEMDD-FLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDP 686

Query: 1212 TGLLNRDEVCVILDNGQISGKVLVYRYPGLHFGDIHVLNAVYLREMEDVVGNAKYGIFFS 1033
            T  L   EVCVIL NGQI+GKVLVYR PGLHFGDIHVL A Y+ ++  VVGNAKY IFFS
Sbjct: 687  TFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFS 746

Query: 1032 TKGPRSVASEIANGDFDGDMYWVSKNNQLLQYFKASSPWTRACPSSNVNHRKPCDYPPDE 853
            +KGPRSVA EIA GDFDGDMYWVS+N+QLL+YF+   PW  +  +  V ++KP ++  DE
Sbjct: 747  SKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADE 806

Query: 852  LEHELFKLFLNTKNQ-NISMGVAADSWQAWTDRYLTANDD--NEKKQLKAKMLELIDIYY 682
            LE+ELFKLFL+T+ Q + +  VAAD+W A  D++L   ++   E+  ++AK+L+LI+IYY
Sbjct: 807  LENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYY 866

Query: 681  DALDAPKT-GKKVRVPNQLKPDCYPHYMEKG-NDYQSCSVLGKICDAVEKYKIGITLRYE 508
            DALDAPK  GKK+ VP  LK    PH+ME+G N Y S S+LG+I D    Y+  +    E
Sbjct: 867  DALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQEEVP-NIE 925

Query: 507  IRRLAFFEHVPIPDAALKFWKENYDNYRQEMTDALSSRNQSETNLADEVINKYKEIMYGC 328
            +++L  FE   +P+     WK  Y+ YR++M DA+     ++   A+  I KYKEI+YG 
Sbjct: 926  VQKLPCFEE-ELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGA 984

Query: 327  DDFKETLRSMNDVHKDALALYHVCYDYAKSKGDVRKCNFVWKVAGHALCHFHATKAKEKC 148
            ++ + + RS  +V+++ALA+Y V YD+A S+  VR C F WKVAG AL   +A K  E+ 
Sbjct: 985  EELEGSPRSNEEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSER- 1042

Query: 147  MLYCLPSVLAKI 112
              +CLPSV+ +I
Sbjct: 1043 SFHCLPSVMREI 1054