BLASTX nr result
ID: Angelica23_contig00028682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00028682
(339 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631155.1| Pentatricopeptide repeat-containing protein ... 164 5e-39
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-39
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 162 3e-38
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,... 153 1e-35
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-34
>ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 785
Score = 164 bits (416), Expect = 5e-39
Identities = 78/113 (69%), Positives = 92/113 (81%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
MYAKCGI+D+A FLDEM KD+VS+SA+ISGCVQNGYAE AL F +MQ S I P + T
Sbjct: 356 MYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
MI LLPACS+LAALQHG C H Y++VRGFT DTSICNA+ DMY KCGK+ ++R
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISR 468
Score = 63.9 bits (154), Expect = 1e-08
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQ-VSKIMPDVA 177
MYAKC ++ A K + ++ K+ V +SA+I G V + AL + M + + P A
Sbjct: 254 MYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPA 313
Query: 178 TMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVA 336
T+ +L AC+ L L+ G H + I G DT++ N++ MY KCG +D A
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA 366
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 164 bits (416), Expect = 5e-39
Identities = 77/113 (68%), Positives = 89/113 (78%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
MYAKCG+IDDA +F DEM+ KDSVSFSA++SGCVQNG A AL F MQ+S I PD+ T
Sbjct: 356 MYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
M+G+LPACS+LAALQHG C H Y IVRGF DT ICNA+ DMY KCGK+ AR
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Score = 79.3 bits (194), Expect = 3e-13
Identities = 37/105 (35%), Positives = 59/105 (56%)
Frame = +1
Query: 4 YAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVATM 183
YAKCGI+ +A + M +D V+++A+I+GC G + A++ ++MQ I P+ +T+
Sbjct: 154 YAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTI 213
Query: 184 IGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKC 318
+G+LP AL HG H Y + R F + + DMY KC
Sbjct: 214 VGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Score = 65.9 bits (159), Expect = 3e-09
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIM-PDVA 177
MYAKC + A K D M ++ VS+SA+I G V + + AL+ F +M + M P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313
Query: 178 TMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVA 336
T+ +L AC+ L L G H Y I G D + N + MY KCG +D A
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366
Score = 55.5 bits (132), Expect = 4e-06
Identities = 30/107 (28%), Positives = 52/107 (48%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
+Y C + A + DE+ + ++ +I NG + A+ + M + P+ T
Sbjct: 52 LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCG 321
+L ACS L A++ G HS++ + G +D +C A+ D Y KCG
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 162 bits (410), Expect = 3e-38
Identities = 76/113 (67%), Positives = 88/113 (77%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
MYAKCG+IDDA +F D M+ KDSVSFSA++SGCVQNG A AL F MQ+S I PD+ T
Sbjct: 356 MYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
M+G+LPACS+LAALQHG C H Y IVRGF DT ICNA+ DMY KCGK+ AR
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAR 468
Score = 79.3 bits (194), Expect = 3e-13
Identities = 37/105 (35%), Positives = 59/105 (56%)
Frame = +1
Query: 4 YAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVATM 183
YAKCGI+ +A + M +D V+++A+I+GC G + A++ ++MQ I P+ +T+
Sbjct: 154 YAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTI 213
Query: 184 IGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKC 318
+G+LP AL HG H Y + R F + + DMY KC
Sbjct: 214 VGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Score = 66.2 bits (160), Expect = 3e-09
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIM-PDVA 177
MYAKC + A K D M ++ VS+SA+I G V + + AL+ F +M + M P
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 178 TMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVA 336
T+ +L AC+ L L G H Y I G D + N + MY KCG +D A
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366
Score = 55.5 bits (132), Expect = 4e-06
Identities = 30/107 (28%), Positives = 52/107 (48%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
+Y C + A + DE+ + ++ +I NG + A+ + M + P+ T
Sbjct: 52 LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCG 321
+L ACS L A++ G HS++ + G +D +C A+ D Y KCG
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 557
Score = 153 bits (387), Expect = 1e-35
Identities = 65/112 (58%), Positives = 93/112 (83%)
Frame = +1
Query: 4 YAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVATM 183
YAKCG + DA ++ EM+ KD VS+SA+ISGC+QNG A+ AL F RM++S + P++ATM
Sbjct: 371 YAKCGTVSDAIRYFHEMELKDEVSYSAIISGCMQNGNAKEALSMFHRMRLSGMDPELATM 430
Query: 184 IGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
+G+LPAC++LAALQHG+C HSY++++GFT++ +ICNA+ DMY KCG++D AR
Sbjct: 431 VGILPACAHLAALQHGSCCHSYALIKGFTSEITICNALIDMYAKCGRIDTAR 482
Score = 72.4 bits (176), Expect = 4e-11
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISG-CVQNGYAEAALKFFLRMQVSKIMPDVA 177
MYAKCG +DDA M ++D V+++++I+G + ++ +MQ + P+ +
Sbjct: 162 MYAKCGCLDDAEMVFSGMPYRDVVAWNSMIAGFSLHRVCYNETIQLLAQMQKDLVRPNSS 221
Query: 178 TMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
T++ +LPA + AL HG H + + RG+ D + + DMY KC + AR
Sbjct: 222 TIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVVATGLLDMYGKCQCIIYAR 275
Score = 57.0 bits (136), Expect = 2e-06
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDW-KDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIM---- 165
MY KC I A F D M ++ V++SA++ V AL F M K
Sbjct: 264 MYGKCQCIIYARNFFDMMSIVRNEVTWSAMLGAYVMCELMREALDLFQYMMRIKDAAVKS 323
Query: 166 PDVATMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVA 336
P T+ +L AC+ L + G C H Y+I GF +D + N + Y KCG V A
Sbjct: 324 PTEVTLATVLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTYAKCGTVSDA 380
Score = 54.3 bits (129), Expect = 1e-05
Identities = 31/86 (36%), Positives = 43/86 (50%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
MYAKCG ID A D M +D VS++A+I +G AL F M + PD T
Sbjct: 471 MYAKCGRIDTARNVFDRMHKRDIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVT 530
Query: 181 MIGLLPACSYLAALQHGACGHSYSIV 258
I LL ACS+ ++ + G ++
Sbjct: 531 FICLLSACSHSGLVKEDSTGWGLQLI 556
>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
predicted protein [Populus trichocarpa]
Length = 799
Score = 149 bits (377), Expect = 2e-34
Identities = 68/113 (60%), Positives = 89/113 (78%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDWKDSVSFSAVISGCVQNGYAEAALKFFLRMQVSKIMPDVAT 180
MYAKCGII+ A +F +EMD +D+VSF+A+ISG VQNG +E L+ FL MQ+S I P+ AT
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
+ +LPAC++LA L +G+C H Y+I+ GFTADT ICNA+ DMY KCGK+D AR
Sbjct: 429 LASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTAR 481
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/113 (34%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +1
Query: 4 YAKCGIIDDAAKFLDEMDWKDSVSFSAVISG-CVQNGYAEAALKFFLRMQVSKIMPDVAT 180
YAKCG +DDA + D+M +D V+++++ISG + G + + ++MQ + + P+ +T
Sbjct: 164 YAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSST 222
Query: 181 MIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVAR 339
++G+LPA + + +L+HG H + + RGF D + + D+Y KC +D AR
Sbjct: 223 IVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYAR 275
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +1
Query: 1 MYAKCGIIDDAAKFLDEMDW-KDSVSFSAVISGCVQNGYAEAALKFFLRMQVSK---IMP 168
+Y KC ID A + D M K+ V++SA++ V + AL+ F ++ + K I+
Sbjct: 264 VYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVL 323
Query: 169 DVATMIGLLPACSYLAALQHGACGHSYSIVRGFTADTSICNAVTDMYCKCGKVDVA 336
T+ ++ C+ L L G C H Y+I GF D + N + MY KCG ++ A
Sbjct: 324 SAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGA 379