BLASTX nr result

ID: Angelica23_contig00028642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028642
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  179 bits (455), Expect = 2e-43
 Identities = 88/121 (72%), Positives = 102/121 (84%)
 Frame = +2

Query: 2   DMLGRAGLLDEAFVFIDTMDIEPNGIVWRTLLGACRIYNNVELAKRANDRLLKLRRDESG 181
           D+LGRAGLL+EAF FIDTM IEPN IVWRTLLGACRI+ NVEL +RAN +LLK+R DESG
Sbjct: 422 DLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESG 481

Query: 182 DYVLLSNVYASRGEWDGAERVRKLMDDSGVWKAPAFSSIDGDNRALMHFLLGLESQKDSQ 361
           DYVLLSN+YASRGEWDG E+VRKLMDDSGV K    S I+GDN+ALMHFL   + + +S+
Sbjct: 482 DYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPKLNSR 541

Query: 362 K 364
           K
Sbjct: 542 K 542


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/110 (78%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   DMLGRAGLLDEAFVFIDTMDIEPNGIVWRTLLGACRIYNNVELAKRANDRLLKLRRDESG 181
           D+LGRAGLL+EAF FIDTM IEPN IVWRTLLGACRI+ NVEL +RAN +LLK+R DESG
Sbjct: 387 DLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESG 446

Query: 182 DYVLLSNVYASRGEWDGAERVRKLMDDSGVWKAPAFSSIDGDNRALMHFL 331
           DYVLLSN+YASRGEWDG E+VRKLMDDSGV K    S I+GDN+ALMHFL
Sbjct: 447 DYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFL 496


>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like, partial [Cucumis sativus]
          Length = 315

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/110 (71%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   DMLGRAGLLDEAFVFIDTMDIEPNGIVWRTLLGACRIYNNVELAKRANDRLLKLRRDESG 181
           D+LGRAGLL EAF FIDTM+IEPN I+WRTLLGACR++ +VEL +RAN++LLK+R+DESG
Sbjct: 195 DILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESG 254

Query: 182 DYVLLSNVYASRGEWDGAERVRKLMDDSGVWKAPAFSSIDGDNRALMHFL 331
           DYVLLSN+YAS+GEWDG ++VRKLMDD GV K    S ID DN  LMHFL
Sbjct: 255 DYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 304


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/110 (71%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   DMLGRAGLLDEAFVFIDTMDIEPNGIVWRTLLGACRIYNNVELAKRANDRLLKLRRDESG 181
           D+LGRAGLL EAF FIDTM+IEPN I+WRTLLGACR++ +VEL +RAN++LLK+R+DESG
Sbjct: 422 DILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESG 481

Query: 182 DYVLLSNVYASRGEWDGAERVRKLMDDSGVWKAPAFSSIDGDNRALMHFL 331
           DYVLLSN+YAS+GEWDG ++VRKLMDD GV K    S ID DN  LMHFL
Sbjct: 482 DYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 531


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/120 (66%), Positives = 95/120 (79%)
 Frame = +2

Query: 2   DMLGRAGLLDEAFVFIDTMDIEPNGIVWRTLLGACRIYNNVELAKRANDRLLKLRRDESG 181
           D+LGRAGLL EAF  I  M+IEPN I+WRTLLGACR++ NVEL + AN+RLLKLRRDESG
Sbjct: 423 DLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESG 482

Query: 182 DYVLLSNVYASRGEWDGAERVRKLMDDSGVWKAPAFSSIDGDNRALMHFLLGLESQKDSQ 361
           DYVLLSN+YAS GEWDGAE VRKLMDD GV K    S I+ D+RA+M FL   + + +S+
Sbjct: 483 DYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFLFDPKPKLNSR 542


Top