BLASTX nr result

ID: Angelica23_contig00028634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028634
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31832.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002279586.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...    78   9e-13
emb|CBI34744.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...    77   2e-12
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...    77   2e-12

>emb|CBI31832.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = -3

Query: 196 VHGWDIKPVQF*VSISDNQNI*TTSCYVREPGN*NYYHGRDFVLENP*AA-KIKFSMMQI 20
           VHGWDIKPV+F +S SD Q+   + CY+ EPG   +YH  DF++E P  + K+KFSM QI
Sbjct: 145 VHGWDIKPVRFQLSTSDGQHA-LSQCYLCEPGKWVHYHAGDFMVEKPNTSMKVKFSMTQI 203

Query: 19  DCTHTK 2
           DCTHTK
Sbjct: 204 DCTHTK 209


>ref|XP_002279586.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
          Length = 279

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
 Frame = -3

Query: 196 VHGWDIKPVQF*VSISDNQNI*TTSCYVREPGN*NYYHGRDFVLENP*AA-KIKFSMMQI 20
           VHGWDIKPV+F +S SD Q+   + CY+ EPG   +YH  DF++E P  + K+KFSM QI
Sbjct: 193 VHGWDIKPVRFQLSTSDGQHA-LSQCYLCEPGKWVHYHAGDFMVEKPNTSMKVKFSMTQI 251

Query: 19  DCTHTK 2
           DCTHTK
Sbjct: 252 DCTHTK 257


>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 NVHGWDIKPVQF*VSISDNQNI*TTSCYVREPGN*NYYHGRDFVLENP*A-AKIKFSMMQ 23
           +VHGWDIKPV+F +  SD Q+  T+ C++ EPG    YH  DFV++N  A  KIKFSM Q
Sbjct: 196 HVHGWDIKPVRFQLWTSDGQHA-TSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQ 254

Query: 22  IDCTHTK 2
           IDCTHTK
Sbjct: 255 IDCTHTK 261


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
           gi|222860863|gb|EEE98405.1| f-box family protein
           [Populus trichocarpa]
          Length = 294

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 NVHGWDIKPVQF*VSISDNQNI*TTSCYVREPGN*NYYHGRDFVLENP*AA-KIKFSMMQ 23
           ++HGWDIKPV+F ++ SD Q    + C++  PGN  YYH  DFV++ P    KIKFSM Q
Sbjct: 200 HIHGWDIKPVRFQLTTSDGQRA-ASKCFLDTPGNWVYYHAGDFVVDRPSELMKIKFSMTQ 258

Query: 22  IDCTHTK 2
           IDCTHTK
Sbjct: 259 IDCTHTK 265


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = -3

Query: 199 NVHGWDIKPVQF*VSISDNQNI*TTSCYVREPGN*NYYHGRDFVLENP*A-AKIKFSMMQ 23
           +VHGWDIKPV+F +  SD Q+  T+ C++ EPG    YH  DFV++N  A  KIKFSM Q
Sbjct: 196 HVHGWDIKPVRFQLWTSDGQHA-TSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQ 254

Query: 22  IDCTHTK 2
           IDCTHTK
Sbjct: 255 IDCTHTK 261


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