BLASTX nr result

ID: Angelica23_contig00028544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028544
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   122   3e-26
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   122   3e-26
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...   121   7e-26
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   120   1e-25

>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 NYFIGRFVSGLPNFSKKKNSE-KWSIQKEGVQGRQLSDALKEKYKNKPWLLEDETGQFQY 33
           NYFIGRFV+GLP FSKKKN++ KWS+ KEG+QGRQ+SDAL+EKYKNKPWLLEDETGQ+QY
Sbjct: 65  NYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETGQYQY 124

Query: 32  HGVLEGAPSA 3
           HG LEG+ SA
Sbjct: 125 HGQLEGSQSA 134


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 NYFIGRFVSGLPNFSKKKNSE-KWSIQKEGVQGRQLSDALKEKYKNKPWLLEDETGQFQY 33
           NYFIGRFV+GLP FSKKKN++ KWS+ KEG+QGRQ+SDAL+EKYKNKPWLLEDETGQ+QY
Sbjct: 70  NYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETGQYQY 129

Query: 32  HGVLEGAPSA 3
           HG LEG+ SA
Sbjct: 130 HGQLEGSQSA 139


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/70 (81%), Positives = 66/70 (94%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 NYFIGRFVSGLPNFSKKKNSE-KWSIQKEGVQGRQLSDALKEKYKNKPWLLEDETGQFQY 33
           NYFIGRFV+GLP+FSKKKN+E KWS+QKEG+QGRQL+DAL+EKYKN+PWLLEDETGQFQY
Sbjct: 71  NYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLEDETGQFQY 130

Query: 32  HGVLEGAPSA 3
            G LEG+ SA
Sbjct: 131 QGHLEGSQSA 140


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
           gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 584

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/70 (81%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 NYFIGRFVSGLPNFSKKKNSE-KWSIQKEGVQGRQLSDALKEKYKNKPWLLEDETGQFQY 33
           NYFIGRFV+GLP FSKKKN+E KWSI KEG+QGRQL+DAL+EK+KNKPWLLEDETGQ+QY
Sbjct: 114 NYFIGRFVTGLPIFSKKKNAENKWSIHKEGLQGRQLTDALREKFKNKPWLLEDETGQYQY 173

Query: 32  HGVLEGAPSA 3
           HG LEG+ SA
Sbjct: 174 HGHLEGSQSA 183


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/70 (80%), Positives = 65/70 (92%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 NYFIGRFVSGLPNFSKKKNSE-KWSIQKEGVQGRQLSDALKEKYKNKPWLLEDETGQFQY 33
           NYFIGRF+SGLPNFSKK+N+E KWS+ KEG+QGRQLSDAL+EKYKN+PWLLEDETGQFQ+
Sbjct: 70  NYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQF 129

Query: 32  HGVLEGAPSA 3
            G LEG+ SA
Sbjct: 130 QGHLEGSQSA 139


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