BLASTX nr result

ID: Angelica23_contig00028541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028541
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15756.3| unnamed protein product [Vitis vinifera]               63   5e-20
ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...    63   5e-20
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...    54   2e-15
ref|XP_002333627.1| predicted protein [Populus trichocarpa] gi|2...    51   1e-12
ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-12

>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score = 63.2 bits (152), Expect(2) = 5e-20
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 756 VSPSSMTPSYMYGGSVGEIRSKSEMNIGAFNDNSFTQGSFSVPGSFP--VRLASGHDRFL 583
           VSP   T S M   S+ ++ S   M IG+F +N+ + GS SVP + P  +R+ S  + F 
Sbjct: 475 VSPGIKTSSCMDNVSIQDLHSAVRMPIGSFVENATSHGSSSVPNTLPSPMRVVSIINEFG 534

Query: 582 LHESRHSSDHENFGNSCPPSNHFGSLPEYYSGSPQVISYNT 460
           L E+ ++ D   FGN   P+ H  SLPEY+      I YN+
Sbjct: 535 LGETSNTLDQMKFGNQSFPNYHPHSLPEYHDNLANAIRYNS 575



 Score = 60.8 bits (146), Expect(2) = 5e-20
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
 Frame = -3

Query: 404 TVADLSIDANPRRLEGVNGRNIYMIDPKVQQAKHHVGVFGSSRPTGCRIPEGHYIQNNST 225
           T+ D++    PR  EG++ R+I+ +       + + G FGSS    C +   H    NS+
Sbjct: 578 TIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGNGSCPVHGLHRAWGNSS 637

Query: 224 MFKRFSLSPLGWPQSLP-----HAHGTPNLPELSRSSSHGINTVSYSHDMINKVSNTQLC 60
            ++  S SP+ WP S       HA     +P   R   H +N VS  H   + V      
Sbjct: 638 SYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIVSPVHH--HHV------ 689

Query: 59  LDGAAQASNQSHWNSEHAY 3
             G+A A N S W+  HAY
Sbjct: 690 --GSAPAVNPSLWDRRHAY 706


>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score = 63.2 bits (152), Expect(2) = 5e-20
 Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 756 VSPSSMTPSYMYGGSVGEIRSKSEMNIGAFNDNSFTQGSFSVPGSFP--VRLASGHDRFL 583
           VSP   T S M   S+ ++ S   M IG+F +N+ + GS SVP + P  +R+ S  + F 
Sbjct: 468 VSPGIKTSSCMDNVSIQDLHSAVRMPIGSFVENATSHGSSSVPNTLPSPMRVVSIINEFG 527

Query: 582 LHESRHSSDHENFGNSCPPSNHFGSLPEYYSGSPQVISYNT 460
           L E+ ++ D   FGN   P+ H  SLPEY+      I YN+
Sbjct: 528 LGETSNTLDQMKFGNQSFPNYHPHSLPEYHDNLANAIRYNS 568



 Score = 60.8 bits (146), Expect(2) = 5e-20
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
 Frame = -3

Query: 404 TVADLSIDANPRRLEGVNGRNIYMIDPKVQQAKHHVGVFGSSRPTGCRIPEGHYIQNNST 225
           T+ D++    PR  EG++ R+I+ +       + + G FGSS    C +   H    NS+
Sbjct: 571 TIGDMTGHVGPRITEGIDNRHIHRVGSNGHPIELNGGAFGSSGNGSCPVHGLHRAWGNSS 630

Query: 224 MFKRFSLSPLGWPQSLP-----HAHGTPNLPELSRSSSHGINTVSYSHDMINKVSNTQLC 60
            ++  S SP+ WP S       HA     +P   R   H +N VS  H   + V      
Sbjct: 631 SYQHHSSSPMIWPNSPSFSNGVHAQRPTQVPGFPRPPPHMLNIVSPVHH--HHV------ 682

Query: 59  LDGAAQASNQSHWNSEHAY 3
             G+A A N S W+  HAY
Sbjct: 683 --GSAPAVNPSLWDRRHAY 699


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
           gi|223550206|gb|EEF51693.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 972

 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
 Frame = -2

Query: 768 QLGTVSPSSMTPSYMYGGSVGEIRSKSEMNIGAFNDNSFTQGSFSVPGSFP--VRLASGH 595
           +L T SP  +  S M  GS   I S  +  +G+F ++     S SVP + P  V + S  
Sbjct: 462 RLATFSPGVIASSCMENGSTQVIHSAIQSPVGSFIES---HRSSSVPNNLPSPVSVTSIS 518

Query: 594 DRFLLHESRHSSDHENFGNSCPPSNHFGSLPEYYSGSPQVISYNT 460
            +F LHE   S D   FGN   PS H  SLPEY  G    + +N+
Sbjct: 519 KQFGLHEPNRSMDEMMFGNQRIPSFHPHSLPEYPDGLANGVPFNS 563



 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
 Frame = -3

Query: 362 EGVNGRNIYMIDPKVQQAKHHVGVFGSSRPTGCRIPEGHYIQNNSTMFKRFSLSPLGWPQ 183
           EG++ R+I  +       + + GVFGSS      +P  HY+ NNS   ++   S + WP 
Sbjct: 580 EGISSRHIQAVSSNGHLMELNGGVFGSSGNGS--LPGHHYMWNNSNTNQQHHSSRMIWPN 637

Query: 182 SLP-----HAHGTPNLPELSRSSSHGINTVSYSHDMINKVSNTQLCLDGAAQASNQSHWN 18
           S       HAH  P++P   R+    +NTV   H +            G+A + N S W 
Sbjct: 638 SSSFTNGVHAHHLPHMPGFPRAPPVMLNTVPAHHHV------------GSAPSVNPSVWE 685

Query: 17  SEHAY 3
             HAY
Sbjct: 686 RRHAY 690


>ref|XP_002333627.1| predicted protein [Populus trichocarpa] gi|222837850|gb|EEE76215.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 50.8 bits (120), Expect(2) = 1e-12
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
 Frame = -3

Query: 404 TVADLSIDANPRRLEGVNGRNIYMIDPKVQQAKHHVGVFGSSRPTGCRIPEGHYIQNNST 225
           T+ D+      +  EG+N  +I  +       +   GV GS     C +P  HY+  NS 
Sbjct: 233 TIRDMPSSFTSKVAEGINSLHIQGVGSNGHLMELIGGVSGSPGAGSCSLPGHHYVWKNSK 292

Query: 224 MFKRFSLSPLGWPQSLP-----HAHGTPNLPELSRSSSHGINTVSYSHDMINKVSNTQLC 60
             ++   S + WP S       HAH  P++P   R  +  +N+    H +          
Sbjct: 293 SGQQHPSSGMIWPNSPSFVNGVHAHHLPHMPGFPRGRAVMLNSAPAPHHI---------- 342

Query: 59  LDGAAQASNQSHWNSEHAY 3
             G+A A N S W  +H +
Sbjct: 343 --GSAPAVNTSLWERQHTF 359



 Score = 48.1 bits (113), Expect(2) = 1e-12
 Identities = 36/102 (35%), Positives = 44/102 (43%)
 Frame = -2

Query: 765 LGTVSPSSMTPSYMYGGSVGEIRSKSEMNIGAFNDNSFTQGSFSVPGSFPVRLASGHDRF 586
           L T SP     SYM   S   + S     +GAF D      S S+    PV  AS   + 
Sbjct: 138 LATFSPGVSASSYMENRSTQVLHSAIPSQLGAFTD-LHRSSSVSINLPSPVT-ASAAKQI 195

Query: 585 LLHESRHSSDHENFGNSCPPSNHFGSLPEYYSGSPQVISYNT 460
            + E +       FGN C PS H  SLPEY+      ISYN+
Sbjct: 196 SISEMK-------FGNQCIPSTHPHSLPEYHDSLANTISYNS 230


>ref|XP_002321750.1| predicted protein [Populus trichocarpa] gi|222868746|gb|EEF05877.1|
           predicted protein [Populus trichocarpa]
          Length = 919

 Score = 48.9 bits (115), Expect(2) = 4e-12
 Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
 Frame = -3

Query: 404 TVADLSIDANPRRLEGVNGRNIYMIDPKVQQAKHHVGVFGSSRPTGCRIPEGHYIQNNST 225
           T+ D+      +  EG+N  +I  +       + + GVFGS     C +P  HY+  NS 
Sbjct: 506 TIRDMPSSFTSKVTEGINSLHIRGVGSNGHMMELNGGVFGSPGTGSCTLPGHHYVWKNSK 565

Query: 224 MFKRFSLSPLGWPQSLP-----HAHGTPNLPELSRSSSHGINTVSYSHDMINKVSNTQLC 60
             ++   + + W  S       HAH  P++P   R  +  +N+    H +          
Sbjct: 566 SGQQHPSNAMIWSNSPSFANGVHAHHVPHMPGFPRGHTVMLNSAPAPHHI---------- 615

Query: 59  LDGAAQASNQSHWNSEHAY 3
             G+A A N S W+    +
Sbjct: 616 --GSAPAVNPSLWDRRQTF 632



 Score = 48.5 bits (114), Expect(2) = 4e-12
 Identities = 34/102 (33%), Positives = 44/102 (43%)
 Frame = -2

Query: 765 LGTVSPSSMTPSYMYGGSVGEIRSKSEMNIGAFNDNSFTQGSFSVPGSFPVRLASGHDRF 586
           L T SP     SYM  GS   + S     +GAF +      S SV  + P  + +   + 
Sbjct: 411 LATFSPGVSASSYMANGSSQVLHSAIPSQLGAFAE---LHRSSSVSNNLPSPVTASAAK- 466

Query: 585 LLHESRHSSDHENFGNSCPPSNHFGSLPEYYSGSPQVISYNT 460
                + S D   FGN C PS H  SLPEY+      I YN+
Sbjct: 467 -----QFSIDEMKFGNKCIPSIHPHSLPEYHDSFANTIPYNS 503


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