BLASTX nr result

ID: Angelica23_contig00028481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028481
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   164   1e-38
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   154   2e-35
ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like...   126   6e-27
gb|ACU23678.1| unknown [Glycine max]                                  125   8e-27
ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...   121   1e-25

>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  164 bits (416), Expect = 1e-38
 Identities = 91/171 (53%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
 Frame = -3

Query: 504 ECAHLSCSMSELRKQKRWVFEHTHVKLSWIEYQLKQKDGILTYPPPLSSSIASPYRGIXX 325
           EC+ + CSMSE  ++ RW F HTH+K+SWI++Q+KQKDG LTYPPPL+ S +SPY     
Sbjct: 4   ECSQMVCSMSE--REHRWFFGHTHLKMSWIQHQIKQKDGYLTYPPPLTPSSSSPYTAAFH 61

Query: 324 XXXXXXXXXXXXXXXXSXXXXXXXXXXXXXI--SGLLHLLVRFLTKNPTS-TASQSGRYP 154
                           S                SGLLHLLVRFL ++P+S T+SQS RYP
Sbjct: 62  KGSTAPSSSSSSGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYP 121

Query: 153 EISSSDAXXXXXXXXXXXHDSGLDQAFIDALPVFVYKEIKGLKQPFDCAVC 1
           EIS SDA           HDSGLDQAFIDALPVF+YKEI GLK+PFDCAVC
Sbjct: 122 EISESDALQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVC 172


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  154 bits (390), Expect = 2e-35
 Identities = 85/166 (51%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
 Frame = -3

Query: 489  SCSMSELRKQKRWVFEHTHVKLSWIEYQLKQKDGILTYPPPLSSSIASPYRGIXXXXXXX 310
            S ++   +++ RW F HTH+K+SWI++Q+KQKDG LTYPPPL+ S +SPY          
Sbjct: 700  SLTLKLKKREHRWFFGHTHLKMSWIQHQIKQKDGYLTYPPPLTPSSSSPYTAAFHKGSTA 759

Query: 309  XXXXXXXXXXXSXXXXXXXXXXXXXI--SGLLHLLVRFLTKNPTS-TASQSGRYPEISSS 139
                       S                SGLLHLLVRFL ++P+S T+SQS RYPEIS S
Sbjct: 760  PSSSSSSGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISES 819

Query: 138  DAXXXXXXXXXXXHDSGLDQAFIDALPVFVYKEIKGLKQPFDCAVC 1
            DA           HDSGLDQAFIDALPVF+YKEI GLK+PFDCAVC
Sbjct: 820  DALQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVC 865


>ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 410

 Score =  126 bits (316), Expect = 6e-27
 Identities = 76/177 (42%), Positives = 97/177 (54%), Gaps = 17/177 (9%)
 Frame = -3

Query: 480 MSELRKQKRWVFEHTHVKLSWIEYQLKQKDGILTYPPPL----------SSSIASPY--- 340
           MSE    +   F+HTH K+ W+++Q++QKDG L+Y PPL          SSS + PY   
Sbjct: 1   MSENMYPRLLFFDHTHSKMVWVKHQIQQKDGYLSYSPPLLSSSSSSSSSSSSSSPPYPLG 60

Query: 339 ----RGIXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXISGLLHLLVRFLTKNPTSTAS 172
               +                    +             ISGLLHLL+RFL K+P+S ++
Sbjct: 61  ATFHKESSLPSSTPPPPPSGTRISPAVLFIIVVLAVLFFISGLLHLLIRFLIKHPSSASA 120

Query: 171 QSGRYPEISSSDAXXXXXXXXXXXHDSGLDQAFIDALPVFVYKEIKGLKQPFDCAVC 1
           QS R+ E+S+SDA           HDSGLDQAFIDALPVF YKEI GLK+PFDCAVC
Sbjct: 121 QSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVC 177


>gb|ACU23678.1| unknown [Glycine max]
          Length = 359

 Score =  125 bits (315), Expect = 8e-27
 Identities = 76/178 (42%), Positives = 97/178 (54%), Gaps = 18/178 (10%)
 Frame = -3

Query: 480 MSELRKQKRWVFEHTHVKLSWIEYQLKQKDGILTYPPPL-----------SSSIASPY-- 340
           MSE    +   F+HTH K+ W+++Q++QKDG L+Y PPL           SSS + PY  
Sbjct: 1   MSENMYPRLLFFDHTHSKMVWVKHQIQQKDGYLSYSPPLLSSSSSSSSSSSSSSSPPYPL 60

Query: 339 -----RGIXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXISGLLHLLVRFLTKNPTSTA 175
                +                    +             ISGLLHLL+RFL K+P+S +
Sbjct: 61  GATFHKESSLPSSTPPPPPSGTRISPAVLFIIVVLAVLFFISGLLHLLIRFLIKHPSSAS 120

Query: 174 SQSGRYPEISSSDAXXXXXXXXXXXHDSGLDQAFIDALPVFVYKEIKGLKQPFDCAVC 1
           +QS R+ E+S+SDA           HDSGLDQAFIDALPVF YKEI GLK+PFDCAVC
Sbjct: 121 AQSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVC 178


>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
           gi|223543377|gb|EEF44908.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  121 bits (304), Expect = 1e-25
 Identities = 73/151 (48%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
 Frame = -3

Query: 426 LSWIEYQLKQKDGILTYPPPLSSS---IASPYRGIXXXXXXXXXXXXXXXXXXSXXXXXX 256
           +SWI+YQ+KQKDG L YPPPLS S   ++ PY                            
Sbjct: 1   MSWIQYQIKQKDGYLAYPPPLSPSPNLLSPPYTTTFHKESTPSSSSSPSSSGTRISPAVL 60

Query: 255 XXXXXXXI----SGLLHLLVRFLTKNPTSTASQ--SGRYPEISSSDAXXXXXXXXXXXHD 94
                  +    SGLLHLLVRFL K+P+S+AS   + RYPEIS  DA           HD
Sbjct: 61  FIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNNRYPEISGPDALQRQLQQLFHLHD 120

Query: 93  SGLDQAFIDALPVFVYKEIKGLKQPFDCAVC 1
           SGLDQAFIDALPVF Y+EI GLK+PFDCAVC
Sbjct: 121 SGLDQAFIDALPVFQYREIVGLKEPFDCAVC 151


Top