BLASTX nr result

ID: Angelica23_contig00028478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028478
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   180   9e-44
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...   158   5e-37
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...   158   5e-37
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/124 (71%), Positives = 101/124 (81%)
 Frame = +1

Query: 94  GTDSQYSPATVFVANLPFTFTNSQLEETFSDVGPIRRCFMVTKKGETEHRGVGFVQFATT 273
           G   Q+ P+TVFV+N P++FTNSQLEETFSDVGPIRRCFMVT+KG TEHRG GFVQFA  
Sbjct: 11  GARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVK 70

Query: 274 EDVNRAIELKNGSSVGGRKIGVKHAMHRPPLQQRRSKGDQVAHEDGDLKSKNTKDDISSE 453
           ED NRAIELKNGSS+GGRKIGVK AMHR PL+QRRSK +Q  H D  +K++  KD  SSE
Sbjct: 71  EDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKTRTEKDS-SSE 129

Query: 454 VVSQ 465
           VV Q
Sbjct: 130 VVKQ 133


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  177 bits (449), Expect = 8e-43
 Identities = 93/139 (66%), Positives = 108/139 (77%)
 Frame = +1

Query: 94  GTDSQYSPATVFVANLPFTFTNSQLEETFSDVGPIRRCFMVTKKGETEHRGVGFVQFATT 273
           G   Q+ P+TVFV+N P++FTNSQLEETFSDVGPIRRCFMVT+KG TEHRG GFVQFA  
Sbjct: 11  GARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVK 70

Query: 274 EDVNRAIELKNGSSVGGRKIGVKHAMHRPPLQQRRSKGDQVAHEDGDLKSKNTKDDISSE 453
           ED NRAIELKNGSS+GGRKIGVK AMHR PL+QRRSK +Q      D+    T+ D SSE
Sbjct: 71  EDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQ-----DDIIKTRTEKDSSSE 125

Query: 454 VVSQEQDQATAPQELEKNV 510
           VV  +Q  A+  QE+EK+V
Sbjct: 126 VV--KQGHASDLQEIEKHV 142


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score =  158 bits (399), Expect = 5e-37
 Identities = 84/147 (57%), Positives = 105/147 (71%), Gaps = 14/147 (9%)
 Frame = +1

Query: 109 YSPATVFVANLPFTFTNSQLEETFSDVGPIRRCFMVTKKGETEHRGVGFVQFATTEDVNR 288
           + P+TVFV N P++FTNSQLEETFSDVGP+RRCFMVT+KG TEHRG GFVQFA  ED NR
Sbjct: 20  HCPSTVFVNNFPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGFGFVQFAVAEDANR 79

Query: 289 AIELKNGSSVGGRKIGVKHAMHRPPLQQRRSKGDQV------AHEDGDL----KSKNTKD 438
           AI+LKNG S  GRKI VKHAMHR PL+QRRSK +QV      A+E+GD     +   TKD
Sbjct: 80  AIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQVAGSTLAANEEGDTSKMEEHPTTKD 139

Query: 439 DISS----EVVSQEQDQATAPQELEKN 507
             +S    + +++E+D +   ++   N
Sbjct: 140 KGTSKRDVQPINEERDTSKRAEQTISN 166


>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
           gi|223547969|gb|EEF49461.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/113 (68%), Positives = 92/113 (81%)
 Frame = +1

Query: 91  EGTDSQYSPATVFVANLPFTFTNSQLEETFSDVGPIRRCFMVTKKGETEHRGVGFVQFAT 270
           E +++++SP TVFV+N P +FTNSQLEETFSDVGPIRRCF+VT+KG +EHRG GFVQFA 
Sbjct: 14  EESETKHSPNTVFVSNFPRSFTNSQLEETFSDVGPIRRCFLVTQKGSSEHRGFGFVQFAI 73

Query: 271 TEDVNRAIELKNGSSVGGRKIGVKHAMHRPPLQQRRSKGDQVAHEDGDLKSKN 429
            ED NRAIELK+GSSV G+KI VKHAM R PL QRR+K  QV   DG  K++N
Sbjct: 74  KEDANRAIELKDGSSVSGQKIFVKHAMSRAPLDQRRAKAAQVVESDGAAKTEN 126


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/139 (56%), Positives = 102/139 (73%)
 Frame = +1

Query: 94  GTDSQYSPATVFVANLPFTFTNSQLEETFSDVGPIRRCFMVTKKGETEHRGVGFVQFATT 273
           G+ S++S +T+FV++LP++FT SQLEETFSDVGPIRRCFMVT+KG TEHRG GFVQFA  
Sbjct: 11  GSASEHSSSTLFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFALK 70

Query: 274 EDVNRAIELKNGSSVGGRKIGVKHAMHRPPLQQRRSKGDQVAHEDGDLKSKNTKDDISSE 453
           +D NRAIE+KNGSSVGGRKI VKHAMHR  L+QRR+K  Q          +    D +++
Sbjct: 71  DDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQ---------GQGQVQDDATK 121

Query: 454 VVSQEQDQATAPQELEKNV 510
            + ++   A+ P++   NV
Sbjct: 122 TIDEKGSVASKPEKHVLNV 140


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