BLASTX nr result

ID: Angelica23_contig00028429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028429
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    61   1e-07
dbj|BAC66628.1| F-box [Prunus mume]                                    60   3e-07
dbj|BAF36718.1| S locus F-box protein with the low allelic seque...    60   3e-07
gb|AFK44336.1| unknown [Lotus japonicus]                               59   4e-07
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    58   1e-06

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
 Frame = -2

Query: 509 IIQILTRIDPKSLARFKCVSKSWYALITHPIFIRKHLHIHTLSNNTHVICNAYNTRNLXX 330
           +++IL+R+  KSL +F+CV KSW +LI+ P F++KHLH+ +        C  +    +  
Sbjct: 54  VVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSR-------CTHFTHHRIIL 106

Query: 329 XXXXXXXXXCSKVVSLLRVDKPTITLLDVKTGSNCSSSGFPSKINFGDFSKKMVLAGSVN 150
                     S  +S L  + P+ T+        C    +P K  F    +   + GS N
Sbjct: 107 SATTAEFHLKSCSLSSL-FNNPSSTV--------CDDLNYPVKNKF----RHDGIVGSCN 153

Query: 149 GVVLVMNVGELNDRFVGLWNPGV----------NMWKPIKVKGEGCFGNDVTRSAYGLG 3
           G++     G+     V LWNP +          N W+P      GCF      +A+GLG
Sbjct: 154 GLLCFAIKGDC----VLLWNPSIRVSKKSPPLGNNWRP------GCF------TAFGLG 196


>dbj|BAC66628.1| F-box [Prunus mume]
          Length = 397

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = -2

Query: 506 IQILTRIDPKSLARFKCVSKSWYALITHPIFIRKHLHIH 390
           +QIL R+ PKSL RFKCV KSW+AL+ +P F+ KHLH++
Sbjct: 3   VQILARLPPKSLMRFKCVCKSWHALLNNPHFVAKHLHLY 41


>dbj|BAF36718.1| S locus F-box protein with the low allelic sequence polymorphism
           3-Sf [Prunus mume]
          Length = 407

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = -2

Query: 506 IQILTRIDPKSLARFKCVSKSWYALITHPIFIRKHLHIH 390
           +QIL R+ PKSL RFKCV KSW+AL+ +P F+ KHLH++
Sbjct: 13  VQILARLPPKSLMRFKCVCKSWHALLNNPHFVAKHLHLY 51


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
 Frame = -2

Query: 509 IIQILTRIDPKSLARFKCVSKSWYALITHPIFIRKHLHI---HTLSNNTHVICNAYNTRN 339
           +++IL+R+  KSL +F+CV KSW  LI+ P FI+KHLH+    TL N+  +I +A     
Sbjct: 68  VVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTLFNHHRIILSA----- 122

Query: 338 LXXXXXXXXXXXCSKVVSLLRVDKPTITLLDVKTGSNCSSSGFPSKINFGDFSKKMVLAG 159
                            +   +   +++ L   T + C    +P K  +    +   + G
Sbjct: 123 ---------------TTAEFHLKSCSVSSLFNSTSTVCEDLNYPVKNKY----RHDGIVG 163

Query: 158 SVNGVVLVMNVGELNDRFVGLWNPGV 81
           S NG++     G+     V LWNP +
Sbjct: 164 SCNGLLCFAIKGDC----VLLWNPSI 185


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 10/179 (5%)
 Frame = -2

Query: 509 IIQILTRIDPKSLARFKCVSKSWYALITHPIFIRKHLHIHTLSNNTHVICNAYNTRNLXX 330
           I++IL ++  KSL RF+CV KSW  +I++P FI+K LH  T   NTH   N         
Sbjct: 13  ILEILIKLPIKSLLRFRCVCKSWLHIISNPYFIKKQLHFST--QNTHFTTN--------- 61

Query: 329 XXXXXXXXXCSKVVSLLRVDKPTITLLDVKTGSNCSSSGFPSKINFGDFSKKMVLAGSVN 150
                     S   +   +   +IT L     +      +P K  F    +   + GS N
Sbjct: 62  -----HRIILSATTAEFHLKSCSITSLFNNPSTVSDDLNYPVKNKF----RHDGIVGSCN 112

Query: 149 GVVLVMNVGELNDRFVGLWNPGV----------NMWKPIKVKGEGCFGNDVTRSAYGLG 3
           G++     G+     V LWNP +          N W+P      GCF      + +GLG
Sbjct: 113 GLLCFAIKGDC----VLLWNPSIRVSKKSPPLGNNWRP------GCF------TCFGLG 155


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