BLASTX nr result

ID: Angelica23_contig00028400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028400
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   138   2e-30
gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           137   5e-30
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   136   7e-30
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   136   9e-30
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   131   2e-28

>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  138 bits (347), Expect = 2e-30
 Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
 Frame = +2

Query: 620  SDMGFSSCPTPVDAGVLCLILVNTAKSVFTMKKIVRVILHALGIVVSQDEYTTESPTNLS 799
            S MG SS P P + GVLC++LVNTA S+   K IVR ILH +GI +S    +++SP   S
Sbjct: 71   SSMGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTS 129

Query: 800  GN---RDSCLETSIEELRSQIPAISYDSLCSYKQLEHECTVCLTEFNPEAVINHLSCGHV 970
                 R +  ET +EE RS+ PAI +D++CS K+ EH+C VCLT F P++ INHL CGH 
Sbjct: 130  EPFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHF 189

Query: 971  FHKICLEKWLKY 1006
            FHK+CLEKWL Y
Sbjct: 190  FHKVCLEKWLDY 201


>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  137 bits (344), Expect = 5e-30
 Identities = 70/127 (55%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
 Frame = +2

Query: 626  MGFSSCPTPVDAGVLCLILVNTAKSVFTMKKIVRVILHALGI-VVSQDEYTTESPTNLSG 802
            MG S   TP DAGV C+ILVNTA S+  +K +VR ILH +GI   S +EY+ E P +   
Sbjct: 1    MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPLDPFE 60

Query: 803  NRDSCLETSIEELRSQIPAISYDSLCSYKQLEHECTVCLTEFNPEAVINHLSCGHVFHKI 982
             R S   + +EE RS+ PA+ YDSLC       EC VCL +FN +A INHLSCGHVFHK+
Sbjct: 61   CRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHKL 120

Query: 983  CLEKWLK 1003
            CLEKWLK
Sbjct: 121  CLEKWLK 127


>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 151

 Score =  136 bits (343), Expect = 7e-30
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
 Frame = +2

Query: 626  MGFSSCPTPVDAGVLCLILVNTAKSVFTMKKIVRVILHALGIVVSQDEYTTESPTNLSGN 805
            MG SS P P + GVLC++LVNTA S+   K IVR ILH +GI +S    +++SP   S  
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSEP 59

Query: 806  ---RDSCLETSIEELRSQIPAISYDSLCSYKQLEHECTVCLTEFNPEAVINHLSCGHVFH 976
               R +  ET +EE RS+ PAI +D++CS K+ EH+C VCLT F P++ INHL CGH FH
Sbjct: 60   FEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFFH 119

Query: 977  KICLEKWLKY 1006
            K+CLEKWL Y
Sbjct: 120  KVCLEKWLDY 129


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
            gi|223526146|gb|EEF28485.1| RING-H2 finger protein ATL3J,
            putative [Ricinus communis]
          Length = 156

 Score =  136 bits (342), Expect = 9e-30
 Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
 Frame = +2

Query: 626  MGFSSCPTPVDAGVLCLILVNTAKSVFTMKKIVRVILHALGIVVSQDEYTT------ESP 787
            MG SS P P + GVLC++LVNTA S+   K IVR ILH +GI +S    +T      E P
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDP 59

Query: 788  TNLSGNRDSCLETSIEELRSQIPAISYDSLCSYKQLEHECTVCLTEFNPEAVINHLSCGH 967
            T+L   R    E+ I E RS+ PA  +DS+C  KQ+EH+C+VCLT F PE+ IN LSCGH
Sbjct: 60   TDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGH 119

Query: 968  VFHKICLEKWLKY 1006
            +FHK+CLEKWL Y
Sbjct: 120  LFHKVCLEKWLDY 132


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
            gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  131 bits (330), Expect = 2e-28
 Identities = 66/133 (49%), Positives = 86/133 (64%), Gaps = 6/133 (4%)
 Frame = +2

Query: 626  MGFSSCPTPVDAGVLCLILVNTAKSVFTMKKIVRVILHALGIVVSQDEYTTESPTNLSGN 805
            MG SS P P + GVLC++LVNT  S+   K IVR ILH +GI +     +  SP      
Sbjct: 1    MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 806  RDSC------LETSIEELRSQIPAISYDSLCSYKQLEHECTVCLTEFNPEAVINHLSCGH 967
             +S        E+ IEE RS+ P + +DS+C  K+LEH+C+VCLT+F PE+ IN LSCGH
Sbjct: 60   PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 968  VFHKICLEKWLKY 1006
            +FHK+CLEKWL Y
Sbjct: 120  LFHKVCLEKWLDY 132


Top