BLASTX nr result

ID: Angelica23_contig00028325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028325
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata] g...    77   3e-12
ref|XP_002520218.1| leucine rich repeat-containing protein, puta...    74   2e-11
ref|NP_563871.1| leucine-rich repeats-ribonuclease inhibitor dom...    72   7e-11
gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domai...    70   4e-10
gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domai...    70   4e-10

>ref|XP_002889813.1| EMB2004 [Arabidopsis lyrata subsp. lyrata]
           gi|297335655|gb|EFH66072.1| EMB2004 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
 Frame = +3

Query: 105 ASTSTLPHHFHPKIFPVEHEWKKDTKCLSSSGNYGGQRLEFSKVVCLNRKTEFKFXXXXX 284
           +STS+L  H  PK      +W+   +      +    RL  S VV L+R           
Sbjct: 4   SSTSSLNLHSLPKASSGLSQWRSGFRYELLGSSVSRNRLLVSPVVILHRSPRLP------ 57

Query: 285 XXXXXXXXXXXXXXQSGKNDWKVFRKDRNSKGVPVKVVAEAIGLLFVPIRTFMLT--VLW 458
                           G    +V+++ + + G P     + I    +P+ +F +   VLW
Sbjct: 58  ------AIKAAYNSDGGSKRSRVYKESQAASGFP-NAKLQQIASSLLPLGSFAVVTFVLW 110

Query: 459 KLVATVL-PKPTKKALEENKSSSEGTVWSFGK--KLLYDFSAKMERESKQHLYDYAKDLR 629
           K+V   + PK  K A  ENKSS++G  WS G    LL  F+AK++RE+KQ L ++AK+LR
Sbjct: 111 KVVEKFMSPKSPKTAAGENKSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELR 170

Query: 630 SFRIVNL 650
           SFR V++
Sbjct: 171 SFRSVDM 177


>ref|XP_002520218.1| leucine rich repeat-containing protein, putative [Ricinus communis]
           gi|223540710|gb|EEF42273.1| leucine rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
 Frame = +3

Query: 348 KVFRKDRNSKGVPVKVVAEAIGLLFVPIRTFMLT--VLWKLVATVL-PKPTKKALEENKS 518
           +V+R+ +    +P   V + I  + +P   F++   VLWKLV  ++ PKP + A+ ENKS
Sbjct: 75  RVYRQSQGESALPNAPVQQ-IASVVMPAGAFLVVTFVLWKLVEKMMMPKPKRAAIVENKS 133

Query: 519 SSEGTVWSF--GKKLLYDFSAKMERESKQHLYDYAKDLRSFRIVNL 650
            S+G  WSF  G  L    +AK++RESKQ L ++AK+LRSF IV++
Sbjct: 134 PSKGMNWSFAAGSNLFPGLTAKIDRESKQKLNEFAKELRSFSIVDM 179


>ref|NP_563871.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
           gi|15810395|gb|AAL07085.1| unknown protein [Arabidopsis
           thaliana] gi|20258921|gb|AAM14154.1| unknown protein
           [Arabidopsis thaliana] gi|332190466|gb|AEE28587.1|
           leucine-rich repeats-ribonuclease inhibitor
           domain-containing protein [Arabidopsis thaliana]
          Length = 605

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
 Frame = +3

Query: 105 ASTSTLPHHFHPKIFPVEHEWKKDTKCLSSSGNYGGQRLEFSKVVCLNRKTEFKFXXXXX 284
           +STS+L  H  PK      +WK   +      +    RL  S VV  +R           
Sbjct: 4   SSTSSLNLHSLPKASSGLGQWKSGFRYELLGSSVSRNRLFVSPVVIHHRSPRLP------ 57

Query: 285 XXXXXXXXXXXXXXQSGKNDWKVFRKDRNSKGVPVKVVAEAIGLLFVPIRTFMLT--VLW 458
                           G    +V+++ + + G P   V + I    +P+ +F +   VLW
Sbjct: 58  ------AIKAAYNSDGGSKRSRVYKESQAASGFPNAKVQQ-IASSVLPLGSFAVVTFVLW 110

Query: 459 KLVATVL-PKPTKKALEENKSSSEGTVWSFGK--KLLYDFSAKMERESKQHLYDYAKDLR 629
           K+V   + PK  K +  EN SS++G  WS G    LL  F+AK++RE+KQ L ++AK+LR
Sbjct: 111 KVVGKFMSPKSPKTSAGENNSSTQGVKWSIGAGTNLLQGFAAKVDREAKQRLNEFAKELR 170

Query: 630 SFRIVNL 650
           SFR V++
Sbjct: 171 SFRSVDM 177


>gb|AEL99003.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
 Frame = +3

Query: 384 PVKVVAEAIGLLFVPIRTFMLT--VLWKLVATVL-PKPTKKALEENKSSSEGTVWSF--G 548
           PVK  A A+     P   F+    VLWKLV  VL PKP K    ENK S+  T WSF  G
Sbjct: 80  PVKEFATAVA----PAGVFLALSFVLWKLVGKVLLPKPQKFTTAENKPSTPATKWSFAPG 135

Query: 549 KKLLYDFSAKMERESKQHLYDYAKDLRSFRIVNL 650
             L  + S K+ER+SK  L D+A++LRSFRIV++
Sbjct: 136 SNLFKNLSQKIERDSKLKLDDFARELRSFRIVDM 169


>gb|AEL99002.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein, partial [Silene latifolia]
          Length = 592

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
 Frame = +3

Query: 384 PVKVVAEAIGLLFVPIRTFMLT--VLWKLVATVL-PKPTKKALEENKSSSEGTVWSF--G 548
           PVK  A A+     P   F+    VLWKLV  VL PKP K    ENK S+  T WSF  G
Sbjct: 80  PVKEFATAVA----PAGVFLALSFVLWKLVGKVLLPKPQKFTTAENKPSTPATKWSFAPG 135

Query: 549 KKLLYDFSAKMERESKQHLYDYAKDLRSFRIVNL 650
             L  + S K+ER+SK  L D+A++LRSFRIV++
Sbjct: 136 SNLFKNLSQKIERDSKLKLDDFARELRSFRIVDM 169


Top