BLASTX nr result

ID: Angelica23_contig00028221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028221
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis th...   169   3e-40
emb|CBI33717.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254...   168   5e-40
ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis...   167   1e-39
ref|XP_002533159.1| RNA binding protein, putative [Ricinus commu...   162   3e-38

>ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis thaliana]
           gi|4468817|emb|CAB38218.1| putative protein [Arabidopsis
           thaliana] gi|7270733|emb|CAB80416.1| putative protein
           [Arabidopsis thaliana] gi|95147308|gb|ABF57289.1|
           At4g37510 [Arabidopsis thaliana]
           gi|332661403|gb|AEE86803.1| Ribonuclease III family
           protein [Arabidopsis thaliana]
          Length = 537

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/88 (87%), Positives = 84/88 (95%)
 Frame = -3

Query: 403 RWLQEKHRRLLMNKFCGRYLREENLHRYIIYSDEVQDSYEHNRRLRNPATTSVQQAIHGL 224
           +WLQEKHRRLLMNKFCGRYLRE+ LH +IIYS+EV D YEHNRRLRNPATT+VQQAIHGL
Sbjct: 450 KWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNPATTAVQQAIHGL 509

Query: 223 SYTIYGKPDVRRLMFEVFDFEQIQPKAI 140
           +YTIYGKPDVRRLMFEVFDFEQIQPKA+
Sbjct: 510 AYTIYGKPDVRRLMFEVFDFEQIQPKAV 537


>emb|CBI33717.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/88 (86%), Positives = 85/88 (96%)
 Frame = -3

Query: 403 RWLQEKHRRLLMNKFCGRYLREENLHRYIIYSDEVQDSYEHNRRLRNPATTSVQQAIHGL 224
           +WLQEKHRRLLMNKFCGRYLR++ LHR+IIYS++VQDSYEHNRRLRNPATT+VQQAIHGL
Sbjct: 196 KWLQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEHNRRLRNPATTAVQQAIHGL 255

Query: 223 SYTIYGKPDVRRLMFEVFDFEQIQPKAI 140
           SY +YGKPDVRRLMFEVFDFEQIQPK +
Sbjct: 256 SYLVYGKPDVRRLMFEVFDFEQIQPKPV 283


>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
          Length = 542

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/88 (86%), Positives = 85/88 (96%)
 Frame = -3

Query: 403 RWLQEKHRRLLMNKFCGRYLREENLHRYIIYSDEVQDSYEHNRRLRNPATTSVQQAIHGL 224
           +WLQEKHRRLLMNKFCGRYLR++ LHR+IIYS++VQDSYEHNRRLRNPATT+VQQAIHGL
Sbjct: 452 KWLQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEHNRRLRNPATTAVQQAIHGL 511

Query: 223 SYTIYGKPDVRRLMFEVFDFEQIQPKAI 140
           SY +YGKPDVRRLMFEVFDFEQIQPK +
Sbjct: 512 SYLVYGKPDVRRLMFEVFDFEQIQPKPV 539


>ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312778|gb|EFH43201.1| ribonuclease III family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/88 (86%), Positives = 83/88 (94%)
 Frame = -3

Query: 403 RWLQEKHRRLLMNKFCGRYLREENLHRYIIYSDEVQDSYEHNRRLRNPATTSVQQAIHGL 224
           +WLQEKHRRLLMNKFCGRYLRE+ LH +I YS+EV D YEHNRRLRNPATT+VQQAIHGL
Sbjct: 450 KWLQEKHRRLLMNKFCGRYLREKRLHNFITYSEEVHDRYEHNRRLRNPATTAVQQAIHGL 509

Query: 223 SYTIYGKPDVRRLMFEVFDFEQIQPKAI 140
           +YTIYGKPDVRRLMFEVFDFEQIQPKA+
Sbjct: 510 AYTIYGKPDVRRLMFEVFDFEQIQPKAV 537


>ref|XP_002533159.1| RNA binding protein, putative [Ricinus communis]
           gi|223527031|gb|EEF29218.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 532

 Score =  162 bits (410), Expect = 3e-38
 Identities = 71/88 (80%), Positives = 86/88 (97%)
 Frame = -3

Query: 403 RWLQEKHRRLLMNKFCGRYLREENLHRYIIYSDEVQDSYEHNRRLRNPATTSVQQAIHGL 224
           +WLQE+HRRLLMNKFCGRYLR+++LH +I+YS++V D+YE+NRRLRNPATT+VQQA+HGL
Sbjct: 445 KWLQERHRRLLMNKFCGRYLRDKHLHHFIVYSEQVIDAYENNRRLRNPATTAVQQALHGL 504

Query: 223 SYTIYGKPDVRRLMFEVFDFEQIQPKAI 140
           SYT+YGKPDVRRLMFEVFDFEQIQPKA+
Sbjct: 505 SYTVYGKPDVRRLMFEVFDFEQIQPKAV 532


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