BLASTX nr result

ID: Angelica23_contig00028153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028153
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   376   e-102
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   375   e-102
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              375   e-102
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   372   e-101
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]        365   3e-99

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  376 bits (965), Expect = e-102
 Identities = 177/220 (80%), Positives = 206/220 (93%)
 Frame = +3

Query: 3   WRLVKSGTPGNLGSFEDILFANNDMQDSPVIVALVPSFKENGCIVGLGYIDLTKRVLGLT 182
           WRLVKSGTPGNLGSFED+LFANN+MQDSP + A++P+F+ENGC +GLGY+DLTKR+LGL 
Sbjct: 110 WRLVKSGTPGNLGSFEDVLFANNEMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLA 169

Query: 183 EFLDDSHFTNLESALVALGCKECLLPVDSTKSSESRSLNDAMSRCGVMVTERKKIEFRGR 362
           EFLDDSHFTNLESALVALGCKECLLP++S KS E R+L+DA++RCGVM+TERKK EF+ R
Sbjct: 170 EFLDDSHFTNLESALVALGCKECLLPIESGKSIECRTLHDALTRCGVMLTERKKNEFKTR 229

Query: 363 DVIQDLSRLVKGSMEPVRDLVTGFELAPGALGALLSYTELLADESNYENYNLKQYSLDSY 542
           D+++DL RLVKGS+EPVRDLV+GFE APGALGALLSY ELLADESNY NY +++Y+LDSY
Sbjct: 230 DLVEDLGRLVKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTIRKYNLDSY 289

Query: 543 MRLDSAAVRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 662
           MRLDSAA+RALNV+ESKTDANKNFSLFGLMNRTCTAGMGK
Sbjct: 290 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 329


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  375 bits (964), Expect = e-102
 Identities = 180/220 (81%), Positives = 207/220 (94%)
 Frame = +3

Query: 3   WRLVKSGTPGNLGSFEDILFANNDMQDSPVIVALVPSFKENGCIVGLGYIDLTKRVLGLT 182
           WRLVKSGTPGNLGSFED+LFANN+MQDSPVIVAL P+F+ENGC VGLG++DLT+RVLGL 
Sbjct: 74  WRLVKSGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLA 133

Query: 183 EFLDDSHFTNLESALVALGCKECLLPVDSTKSSESRSLNDAMSRCGVMVTERKKIEFRGR 362
           EFLDDS FTN+ESALVALGC+ECLLP +S KSSE+R+L+DA+SRCGVM+TERK+ EF+ R
Sbjct: 134 EFLDDSQFTNVESALVALGCRECLLPSESAKSSETRTLHDALSRCGVMLTERKRTEFKAR 193

Query: 363 DVIQDLSRLVKGSMEPVRDLVTGFELAPGALGALLSYTELLADESNYENYNLKQYSLDSY 542
           D++QDL RLVKGS+EPVRDLV+GFELAPGALG LLSY ELLADESNY N+ +++Y+LDSY
Sbjct: 194 DLVQDLGRLVKGSIEPVRDLVSGFELAPGALGLLLSYAELLADESNYGNFTIQRYNLDSY 253

Query: 543 MRLDSAAVRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 662
           MRLDSAAVRALNV+ESKTDANKNFSLFGLMNRTCTAGMGK
Sbjct: 254 MRLDSAAVRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 293


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  375 bits (964), Expect = e-102
 Identities = 180/220 (81%), Positives = 207/220 (94%)
 Frame = +3

Query: 3   WRLVKSGTPGNLGSFEDILFANNDMQDSPVIVALVPSFKENGCIVGLGYIDLTKRVLGLT 182
           WRLVKSGTPGNLGSFED+LFANN+MQDSPVIVAL P+F+ENGC VGLG++DLT+RVLGL 
Sbjct: 114 WRLVKSGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLA 173

Query: 183 EFLDDSHFTNLESALVALGCKECLLPVDSTKSSESRSLNDAMSRCGVMVTERKKIEFRGR 362
           EFLDDS FTN+ESALVALGC+ECLLP +S KSSE+R+L+DA+SRCGVM+TERK+ EF+ R
Sbjct: 174 EFLDDSQFTNVESALVALGCRECLLPSESAKSSETRTLHDALSRCGVMLTERKRTEFKAR 233

Query: 363 DVIQDLSRLVKGSMEPVRDLVTGFELAPGALGALLSYTELLADESNYENYNLKQYSLDSY 542
           D++QDL RLVKGS+EPVRDLV+GFELAPGALG LLSY ELLADESNY N+ +++Y+LDSY
Sbjct: 234 DLVQDLGRLVKGSIEPVRDLVSGFELAPGALGLLLSYAELLADESNYGNFTIQRYNLDSY 293

Query: 543 MRLDSAAVRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 662
           MRLDSAAVRALNV+ESKTDANKNFSLFGLMNRTCTAGMGK
Sbjct: 294 MRLDSAAVRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 333


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  372 bits (955), Expect = e-101
 Identities = 180/220 (81%), Positives = 201/220 (91%)
 Frame = +3

Query: 3   WRLVKSGTPGNLGSFEDILFANNDMQDSPVIVALVPSFKENGCIVGLGYIDLTKRVLGLT 182
           W+LVKSGTPGN GSFEDILFANN+MQDSPVIVAL P F +NGC VGLGY+D+TKRVLGL 
Sbjct: 114 WKLVKSGTPGNFGSFEDILFANNEMQDSPVIVALAPKFDQNGCTVGLGYVDITKRVLGLA 173

Query: 183 EFLDDSHFTNLESALVALGCKECLLPVDSTKSSESRSLNDAMSRCGVMVTERKKIEFRGR 362
           EFLDDSHFTNLESALVALGC+ECL+P ++ KSSESR L DA+SRCGVMVTERKK EF+GR
Sbjct: 174 EFLDDSHFTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGR 233

Query: 363 DVIQDLSRLVKGSMEPVRDLVTGFELAPGALGALLSYTELLADESNYENYNLKQYSLDSY 542
           D++QDL RLVKGS+EPVRDLV+ FE A GALG +LSY ELLAD+SNY NY +KQY+LDSY
Sbjct: 234 DLVQDLGRLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLDSY 293

Query: 543 MRLDSAAVRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 662
           MRLDSAA+RALNVMESK+DANKNFSLFGLMNRTCTAGMGK
Sbjct: 294 MRLDSAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGK 333


>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 942

 Score =  365 bits (938), Expect = 3e-99
 Identities = 178/220 (80%), Positives = 199/220 (90%)
 Frame = +3

Query: 3   WRLVKSGTPGNLGSFEDILFANNDMQDSPVIVALVPSFKENGCIVGLGYIDLTKRVLGLT 182
           WRLVK+GTPG LGSFEDILFANN+MQDSPVIVAL P+  +NGC +GLGY+D+TKR+LGL 
Sbjct: 114 WRLVKNGTPGVLGSFEDILFANNEMQDSPVIVALAPNSSQNGCTIGLGYVDITKRILGLA 173

Query: 183 EFLDDSHFTNLESALVALGCKECLLPVDSTKSSESRSLNDAMSRCGVMVTERKKIEFRGR 362
           EFLDDSHFTNLESALVALGC+ECL+P ++ KSSE R L DA+SRCGVMVTERKK EF+GR
Sbjct: 174 EFLDDSHFTNLESALVALGCRECLVPAETGKSSEYRPLYDAISRCGVMVTERKKAEFKGR 233

Query: 363 DVIQDLSRLVKGSMEPVRDLVTGFELAPGALGALLSYTELLADESNYENYNLKQYSLDSY 542
           D++QDL RLVKGS EPVRDLV+GFE A GALG +LSY ELLADESNY NY +KQY+L SY
Sbjct: 234 DLVQDLGRLVKGSTEPVRDLVSGFECAAGALGCILSYAELLADESNYGNYIVKQYNLSSY 293

Query: 543 MRLDSAAVRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 662
           MRLDSAA+RALNVMESKTDANKNFSLFGLMNRTCTAGMGK
Sbjct: 294 MRLDSAAMRALNVMESKTDANKNFSLFGLMNRTCTAGMGK 333


Top