BLASTX nr result

ID: Angelica23_contig00028082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00028082
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   435   e-120
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   411   e-112
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   411   e-112
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   406   e-111

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  435 bits (1118), Expect = e-120
 Identities = 218/268 (81%), Positives = 246/268 (91%)
 Frame = +1

Query: 1    MEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAK 180
            MEAIN++ +VI+CGETGCGKTTQVPQFLYEAGFGS ++SV SG+IGVTQPRRVAVLATAK
Sbjct: 368  MEAINDHTAVIICGETGCGKTTQVPQFLYEAGFGSKQASVQSGIIGVTQPRRVAVLATAK 427

Query: 181  RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAH 360
            RVAFELGL LGKEVGFQVRHDK IGD+CSIKFMTDGILLRE+QNDF L+RYSVIILDEAH
Sbjct: 428  RVAFELGLSLGKEVGFQVRHDKMIGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAH 487

Query: 361  ERSLNTDILIGMLSRIIQERQRIYEEQKKQDLLFGKRTSPEKKIYPLKLVLMSATLRVED 540
            ERSLNTDILIGMLSR+IQ RQ++YEEQ +Q +L G R SPE  +  LKLVLMSATLRVED
Sbjct: 488  ERSLNTDILIGMLSRVIQVRQKLYEEQ-QQMMLSGVRISPESMVPQLKLVLMSATLRVED 546

Query: 541  FVSGNKIFSEPPPVIEVPARQYPVDIHFSKRTEIVDYVGQAYKKVLSIHKKLPPGGILVF 720
            F+SG ++F  PPPVIEVP+RQ+PV IHFSKRTEIVDY+GQAYKK+LSIHKKLP GGILVF
Sbjct: 547  FISGRRLFHTPPPVIEVPSRQFPVTIHFSKRTEIVDYIGQAYKKILSIHKKLPQGGILVF 606

Query: 721  VTGQREVEYLCQKLRKASREIVKSSSRR 804
            VTGQREVEYLCQKLRKASRE++ +SS++
Sbjct: 607  VTGQREVEYLCQKLRKASRELMLNSSKQ 634


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  422 bits (1085), Expect = e-116
 Identities = 208/267 (77%), Positives = 241/267 (90%)
 Frame = +1

Query: 1   MEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAK 180
           MEAINE+ +VI+CGETGCGKTTQVPQFLYEAG+GS+ S V +G+IGVTQPRR+AVLATA+
Sbjct: 180 MEAINEHSTVIICGETGCGKTTQVPQFLYEAGYGSNHSVVRNGVIGVTQPRRIAVLATAR 239

Query: 181 RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAH 360
           RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRE+Q D LLKRYSVIILDEAH
Sbjct: 240 RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLREVQTDILLKRYSVIILDEAH 299

Query: 361 ERSLNTDILIGMLSRIIQERQRIYEEQKKQDLLFGKRTSPEKKIYPLKLVLMSATLRVED 540
           ERS+NTDILIGMLSR+IQ RQ+ YE+Q+K  +L G+  SPE  I+PLKLVLMSATLRVED
Sbjct: 300 ERSVNTDILIGMLSRVIQLRQKKYEQQQKL-VLSGQSLSPENMIFPLKLVLMSATLRVED 358

Query: 541 FVSGNKIFSEPPPVIEVPARQYPVDIHFSKRTEIVDYVGQAYKKVLSIHKKLPPGGILVF 720
           F+S  ++F +PPPVI VP RQ+ V +HFSKRTE VDY+GQAYKKV+SIHK+LP GGILVF
Sbjct: 359 FISERRLFHDPPPVINVPTRQFEVTVHFSKRTETVDYIGQAYKKVMSIHKRLPQGGILVF 418

Query: 721 VTGQREVEYLCQKLRKASREIVKSSSR 801
           VTGQREVEYLCQKLRKAS E++ ++++
Sbjct: 419 VTGQREVEYLCQKLRKASTELIANTAK 445


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  411 bits (1056), Expect = e-112
 Identities = 208/284 (73%), Positives = 247/284 (86%), Gaps = 1/284 (0%)
 Frame = +1

Query: 1    MEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAK 180
            MEAINEN  VI+CGETGCGKTTQVPQFLYEAGFGSS+SS   G IGVTQPRRVAVLATAK
Sbjct: 299  MEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAK 358

Query: 181  RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAH 360
            RVA+ELG+ LGKEVGFQVR+DK+IGD  SIKFMTDGILLRE+Q+DFLLKRYSV+ILDEAH
Sbjct: 359  RVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILLREVQHDFLLKRYSVLILDEAH 418

Query: 361  ERSLNTDILIGMLSRIIQERQRIYEEQKKQDLLFGKRTSPEKKIYPLKLVLMSATLRVED 540
            ERS+NTDILIGMLSR+++ RQ ++ +Q +Q  L G + SPE  I+PLKLVLMSATLRVED
Sbjct: 419  ERSMNTDILIGMLSRVVKLRQDLHMKQ-RQLTLSGGKISPENMIFPLKLVLMSATLRVED 477

Query: 541  FVSGNKIFSEPPPVIEVPARQYPVDIHFSKRTEIVDYVGQAYKKVLSIHKKLPPGGILVF 720
            FVSG ++F   PP+IEVP RQ+PV +HFSKRT+IVDY+GQAYKKV++IHKKLPPGGILVF
Sbjct: 478  FVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTDIVDYIGQAYKKVMAIHKKLPPGGILVF 537

Query: 721  VTGQREVEYLCQKLRKASREIVKSSSRRI-ENATAMLEGNCAED 849
            VTGQREVE LC+KLR+AS++++K +S R  EN   ++E N  ++
Sbjct: 538  VTGQREVENLCKKLREASKKLIKKTSERHGENNNGIVEMNSIQN 581


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  411 bits (1056), Expect = e-112
 Identities = 208/284 (73%), Positives = 247/284 (86%), Gaps = 1/284 (0%)
 Frame = +1

Query: 1    MEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAK 180
            MEAINEN  VI+CGETGCGKTTQVPQFLYEAGFGSS+SS   G IGVTQPRRVAVLATAK
Sbjct: 299  MEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAK 358

Query: 181  RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAH 360
            RVA+ELG+ LGKEVGFQVR+DK+IGD  SIKFMTDGILLRE+Q+DFLLKRYSV+ILDEAH
Sbjct: 359  RVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILLREVQHDFLLKRYSVLILDEAH 418

Query: 361  ERSLNTDILIGMLSRIIQERQRIYEEQKKQDLLFGKRTSPEKKIYPLKLVLMSATLRVED 540
            ERS+NTDILIGMLSR+++ RQ ++ +Q +Q  L G + SPE  I+PLKLVLMSATLRVED
Sbjct: 419  ERSMNTDILIGMLSRVVKLRQDLHMKQ-RQLTLSGGKISPENMIFPLKLVLMSATLRVED 477

Query: 541  FVSGNKIFSEPPPVIEVPARQYPVDIHFSKRTEIVDYVGQAYKKVLSIHKKLPPGGILVF 720
            FVSG ++F   PP+IEVP RQ+PV +HFSKRT+IVDY+GQAYKKV++IHKKLPPGGILVF
Sbjct: 478  FVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTDIVDYIGQAYKKVMAIHKKLPPGGILVF 537

Query: 721  VTGQREVEYLCQKLRKASREIVKSSSRRI-ENATAMLEGNCAED 849
            VTGQREVE LC+KLR+AS++++K +S R  EN   ++E N  ++
Sbjct: 538  VTGQREVENLCKKLREASKKLIKKTSERHGENNNGIVEMNSIQN 581


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score =  406 bits (1043), Expect = e-111
 Identities = 205/272 (75%), Positives = 241/272 (88%), Gaps = 1/272 (0%)
 Frame = +1

Query: 1    MEAINENISVILCGETGCGKTTQVPQFLYEAGFGSSRSSVNSGMIGVTQPRRVAVLATAK 180
            MEAIN N SVI+CGETGCGKTTQVPQFLYEAG+GSS+    SG+IGVTQPRRVAVLATAK
Sbjct: 282  MEAINYNSSVIVCGETGCGKTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAK 341

Query: 181  RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLRELQNDFLLKRYSVIILDEAH 360
            RVA+ELG+ LGKEVGFQVR+DK+IG+NCSIKFMTDGILLRE+QND LL+RYSV+ILDEAH
Sbjct: 342  RVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLREVQNDILLRRYSVLILDEAH 401

Query: 361  ERSLNTDILIGMLSRIIQERQRIYEEQKKQDLLFGKRTSPEKKIYPLKLVLMSATLRVED 540
            ERSLNTDILIGMLSR+I+ RQ+IY+EQ+K  +L G+  SP+K ++PLKLVLMSATLRV+D
Sbjct: 402  ERSLNTDILIGMLSRVIRTRQKIYDEQQKM-VLSGESISPDKMVFPLKLVLMSATLRVQD 460

Query: 541  FVSGNKIFSEPPPVIEVPARQYPVDIHFSKRTEIVDYVGQAYKKVLSIHKKLPPGGILVF 720
            F SG ++F  PPPVIEVP RQ+PV ++F+K+TEI DYVG AYKK+L+IHKKLP GGILVF
Sbjct: 461  FTSG-RLFHTPPPVIEVPTRQFPVTMYFAKKTEITDYVGAAYKKILAIHKKLPSGGILVF 519

Query: 721  VTGQREVEYLCQKLRKASRE-IVKSSSRRIEN 813
            VTGQREVE LC+KLRKAS+E I+K     +EN
Sbjct: 520  VTGQREVEDLCRKLRKASKEFIMKKVKGSVEN 551


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